LOCUS RID39979.1 1773 aa PRT CON 13-SEP-2018 DEFINITION Brassica rapa hypothetical protein protein. ACCESSION CM010637-62 PROTEIN_ID RID39979.1 SOURCE Brassica rapa (field mustard) ORGANISM Brassica rapa Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica. REFERENCE 1 (bases 1 to 19914974) AUTHORS Bowman,J., Kohchi,T., Yamato,K., Jenkins,J., Shu,S., Ishizaki,K., Yamaoka,S., Nishihama,R., Nakamura,Y., Berger,F., Adam,C., Aki,S., Althoff,F., Araki,T., Arteaga-Vazquez,M., Balasubrmanian,S., Bauer,D., Boehm,C., Briginshaw,L., Caballero-Perez,J., Catarino,B., Chen,F., Chiyoda,S., Chovatia,M., Davies,K., Delmans,M., Demura,T., Dierschke,T., Dolan,L., Dorantes-Acosta,A., Eklund,D., Florent,S., Flores-Sandoval,E., Fujiyama,A., Fukuzawa,H., Galik,B., Grimanelli,D., Grimwood,J., Grossniklaus,U., Hamada,T., Haseloff,J., Hetherington,A., Higo,A., Hirakawa,Y., Hundley,H., Ikeda,Y., Inoue,K., Inoue,S., Ishida,S., Jia,Q., Kakita,M., Kanazawa,T., Kawai,Y., Kawashima,T., Kennedy,M., Kinose,K., Kinoshita,T., Kohara,Y., Koide,E., Komatsu,K., Kopischke,S., Kubo,M., Kyozuka,J., Lagercrantz,U., Lin,S., Lindquist,E., Lipzen,A., Lu,C., Luna,E., Martienssen,R., Minamino,N., Mizutani,M., Mizutani,M., Mochizuki,N., Monte,I., Mosher,R., Nagasaki,H., Nakagami,H., Naramoto,S., Nishitani,K., Ohtani,M., Okamoto,T., Okumura,M., Phillips,J., Pollak,B., Reinders,A., Roevekamp,M., Sano,R., Sawa,S., Schmid,M., Shirakawa,M., Solano,R., Spunde,A., Suetsugu,N., Sugano,S., Sugiyama,A., Sun,R., Suzuki,Y., Takenaka,M., Takezawa,D., Tomogane,H., Tsuzuki,M., Ueda,T., Umeda,M., Ward,J., Watanabe,Y., Yazaki,K., Yokoyama,R., Yoshitake,Y., Yotsui,I., Zachgo,S. and Schmutz,J. TITLE WGS assembly of Brassica rapa FPsc JOURNAL Unpublished REFERENCE 2 (bases 1 to 19914974) AUTHORS Bowman,J., Kohchi,T., Yamato,K., Jenkins,J., Shu,S., Ishizaki,K., Yamaoka,S., Nishihama,R., Nakamura,Y., Berger,F., Adam,C., Aki,S., Althoff,F., Araki,T., Arteaga-Vazquez,M., Balasubrmanian,S., Bauer,D., Boehm,C., Briginshaw,L., Caballero-Perez,J., Catarino,B., Chen,F., Chiyoda,S., Chovatia,M., Davies,K., Delmans,M., Demura,T., Dierschke,T., Dolan,L., Dorantes-Acosta,A., Eklund,D., Florent,S., Flores-Sandoval,E., Fujiyama,A., Fukuzawa,H., Galik,B., Grimanelli,D., Grimwood,J., Grossniklaus,U., Hamada,T., Haseloff,J., Hetherington,A., Higo,A., Hirakawa,Y., Hundley,H., Ikeda,Y., Inoue,K., Inoue,S., Ishida,S., Jia,Q., Kakita,M., Kanazawa,T., Kawai,Y., Kawashima,T., Kennedy,M., Kinose,K., Kinoshita,T., Kohara,Y., Koide,E., Komatsu,K., Kopischke,S., Kubo,M., Kyozuka,J., Lagercrantz,U., Lin,S., Lindquist,E., Lipzen,A., Lu,C., Luna,E., Martienssen,R., Minamino,N., Mizutani,M., Mizutani,M., Mochizuki,N., Monte,I., Mosher,R., Nagasaki,H., Nakagami,H., Naramoto,S., Nishitani,K., Ohtani,M., Okamoto,T., Okumura,M., Phillips,J., Pollak,B., Reinders,A., Roevekamp,M., Sano,R., Sawa,S., Schmid,M., Shirakawa,M., Solano,R., Spunde,A., Suetsugu,N., Sugano,S., Sugiyama,A., Sun,R., Suzuki,Y., Takenaka,M., Takezawa,D., Tomogane,H., Tsuzuki,M., Ueda,T., Umeda,M., Ward,J., Watanabe,Y., Yazaki,K., Yokoyama,R., Yoshitake,Y., Yotsui,I., Zachgo,S. and Schmutz,J. TITLE Direct Submission JOURNAL Submitted (22-JUN-2018) US DOE Joint Genome Institute, 400 Mitchell Drive, Walnut Creek, CA 94598, USA COMMENT ##Genome-Assembly-Data-START## Assembly Method :: Meraculous v. May_2013 Assembly Name :: Brassica_rapa_FPsc_v1.3 Genome Coverage :: 155x Sequencing Technology :: Illumina Hiseq ##Genome-Assembly-Data-END## FEATURES Qualifiers source /organism="Brassica rapa" /mol_type="genomic DNA" /cultivar="FPsc (B3)" /db_xref="taxon:3711" /chromosome="A10" protein /locus_tag="BRARA_J00053" /db_xref="Phytozome:Brara.J00053" intron_pos 21:1 (1/22) intron_pos 42:0 (2/22) intron_pos 73:0 (3/22) intron_pos 97:1 (4/22) intron_pos 192:1 (5/22) intron_pos 215:0 (6/22) intron_pos 259:0 (7/22) intron_pos 273:0 (8/22) intron_pos 445:0 (9/22) intron_pos 496:2 (10/22) intron_pos 671:0 (11/22) intron_pos 692:0 (12/22) intron_pos 726:0 (13/22) intron_pos 832:0 (14/22) intron_pos 863:0 (15/22) intron_pos 897:0 (16/22) intron_pos 932:0 (17/22) intron_pos 976:2 (18/22) intron_pos 1038:0 (19/22) intron_pos 1082:0 (20/22) intron_pos 1119:2 (21/22) intron_pos 1149:0 (22/22) BEGIN 1 MAPKSNRGKT KGDKKKKEEK VLPVMVDVIV NLPDETEAIL KGISTDRIID VRRLLSVNFD 61 TCHVTNYSLS HEVRGSQLKD TVDVSALKPC VLTLTEEDYN EGTAMAHVRR LLDVVACTTC 121 FGPSPEKSDS VKNAQVKGGG KNPKQSETSP PPSPAPKDAV VDEAGETSHS FPKLGSFYEF 181 FSLAHLTPPL QYVRLVAKRE TEDIAAEDHL LSIDVKLCNG KLVHVEGCRK GFYSVGKQRI 241 ICHNLVDLLR QISRAFDNAY SDLLKAFSER NKFGNLPYGF RANTWLIPPS AAQSPAAFPP 301 LPVEDERWGG DGGGQGRDGS YDLVPWANEF AFIASMPCKT AEERQLRDRK VFLLHNLFVD 361 VATFRAIKAV QKVMADPVLA EDSQVLYSET VGDLSVTVTR DTSNASSKVD TKIDGIQATG 421 LDKTKLMERN LLKGLTADEN TAAHDVATLG TISLKYCGYI SVVKIEKENE KLSPPSQIVD 481 LLEQPEGGAN ALNINSLRFL LHKSSPEQNK KTHQQQDDEL TSSREFVSKM LEESLVKLEE 541 EEIDRDSIMR WELGACWIQH LQDQKNTEKD KKQTNEKSKN ELKVEGLGKP LKSLNSNKKK 601 TDASSPKAQQ TAVSSQVDTA SSEADNAAIT ATLQSDAEKN AQENVLILKN LLSEAAFTRL 661 QESDTGLHDK SLQELVDLAQ KYYTEVAIPK LVADFGSLEL SPVDGRTLTD FMHTRGLRMR 721 SLGYVVKLSD KLSHVQSLCV HEMIVRALKH ILQAVISAVA ADTDKIAAKV ATALNMMLGI 781 PKTEAENSWN VHPLIFRWLE KFLKKRYDYD LNAFSYKDLR KFAILRGLCH KVGIELIPRD 841 FDMESPEPFQ KTDVVSLVPV HKQAACSSAD GRQLLESSKT ALDKGKLEDA VTYGTKALAK 901 LVAVCGPYHR MTAGAYSLLA VVLYHTGDFN QATIYQQKAL DINERELGLD HPDTMKSYGD 961 LAVFYYRLQH TELALKYVKR ALYLLHLTCG PSHPNTAATY INVAMMEEGL GNVHVALRYL 1021 HKALKCNQRL LGPDHIQTAA SYHAIAIALS LMEAYHLSVQ HEQTTLRILR AKLGPDDLRT 1081 QDAAAWLEYF ESKAFEQQEA ARNGTPKPDA SIASKGHLSV SDLLDFINPS HNAKGKQSVA 1141 AKRKSYMKLK EKSNQNVVSE QLTETPRENQ KEMSEEETEA TGSEDGQSSD ANQEAILAPA 1201 EEPPSHPVID EAIMDNSNPT TSAEGSTETQ HPDGSEDGWQ PVHRPRSAGS YGRRLKQRRA 1261 SVGKVYTYQK KNVEADNDNP VLQNATQPNA TYYVLKKRTA SYANYGDHHS PGMTTQGTKF 1321 GRKAVKTLAY RVKSTQPSSD NPKTSAETSE EDGLKADASP AVPSGLSSNV QNEAYPKSSV 1381 VSLGKSPSYK EVALAPPGSI AKYQVWAPQA EASDKQEEKK SEEGTSVELT RDEQMITVSE 1441 KEVKNEISAD AESSKPQGKE EIEVELQSSE VEFKGNNLNG NEESGGGIQV EEPVLEDKEG 1501 VTDMIHSNTE QEVKDQLAAD SDDLKEKLGI SATDSSDAPR ELLLPNKKLS ASAVPFNPSS 1561 PPSIIRPTPI GMNIGPSWPV NMTLHHGPGP FPSPPTTPNL MQPMSFVYPP PYTQSVPTST 1621 YPVTSGPFHP NQFPWPHMSE FVPRTVWPGC HPVEFPPPHM IAAEPIASTV LEPTVILPTD 1681 IDTSGVEEGK QDVAATTDSV NHVNAVASSE MENGTKKFED DEKTFSILLR GRRNRKQTLR 1741 MPISLLNRPY DSQPFKIAYS RVIRGSEAPK SAA //