LOCUS       QOD50906.1               653 aa    PRT              BCT 28-SEP-2020
DEFINITION  Pseudomonas aeruginosa dimethylglycine demethylation protein
            DgcB protein.
ACCESSION   CP058257-5849
PROTEIN_ID  QOD50906.1
SOURCE      Pseudomonas aeruginosa
  ORGANISM  Pseudomonas aeruginosa
            Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales;
            Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (bases 1 to 6580692)
  AUTHORS   Alamri,A.M. and Alnimr,A.M.
  TITLE     Whole Genome Sequence of an extensively Drug resistant Pseudomonas
            aeruginosa
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 6580692)
  AUTHORS   Alamri,A.M. and Alnimr,A.M.
  TITLE     Direct Submission
  JOURNAL   Submitted (21-JUN-2020) Department of Clinical Laboratory Sciences,
            Imam Abdulrahman Bin Faisal University, Dammam 35211, Saudi Arabia
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date             :: 20-JUN-2020
            Assembly Method           :: SOAPdenovo v. 1.05
            Genome Representation     :: Full
            Expected Final Version    :: Yes
            Reference-guided Assembly :: NC_002516.2
            Genome Coverage           :: 100.0x
            Sequencing Technology     :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 06/29/2020 17:07:23
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 6,083
            CDSs (total)                      :: 6,023
            Genes (coding)                    :: 5,942
            CDSs (with protein)               :: 5,942
            Genes (RNA)                       :: 60
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 81
            CDSs (without protein)            :: 81
            Pseudo Genes (ambiguous residues) :: 6 of 81
            Pseudo Genes (frameshifted)       :: 33 of 81
            Pseudo Genes (incomplete)         :: 47 of 81
            Pseudo Genes (internal stop)      :: 7 of 81
            Pseudo Genes (multiple problems)  :: 10 of 81
            CRISPR Arrays                     :: 3
            ##Genome-Annotation-Data-END##
FEATURES             Qualifiers
     source          /organism="Pseudomonas aeruginosa"
                     /mol_type="genomic DNA"
                     /strain="PA179"
                     /isolation_source="blood"
                     /host="Homo sapiens"
                     /db_xref="taxon:287"
                     /country="Saudi Arabia: Khobar"
                     /lat_lon="26.217192 N 50.197140 E"
                     /collection_date="2017"
                     /collected_by="Aisha Alamri"
     protein         /gene="dgcB"
                     /locus_tag="HWH41_29545"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_254086.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /transl_table=11
BEGIN
        1 MLDTLLPVLL FAALALAVLG AAKRFLMWRR GRPAKVDWIG GLLQMPRRYL VDLHHVVERD
       61 RYMSRTHVAT AGGFVLAALL AILVHGFGLH GRILGFALLA ATALMFVGAL FVARRRLDPP
      121 SRLSKGPWMR LPKSLLAFAA SFFLATLPVA GILPEGFGGW FLAGLLAIGV AWGVSELFLG
      181 MTWGGPMKHA FAGALHLAWH RRAERFGGGR STGLKALDLA DPQAPLGVEK PSDFTWNQLL
      241 GFDACVQCGK CEAMCPAFAA GQPLNPKKLI QDMVIGLAGG NDAKFAGSPY PGKPLGEHGG
      301 GPHQPIVALD GKALVDADTL WSCTTCRACV EECPMMIEHV DAIVDMRRHL TLEKGATPNK
      361 GAEVLDNLIA TDNPGGFAPG GRLNWAADLN LPLMSEKKSA DVLFWVGDGA FDMRNQRTLR
      421 AFVKILKAAA VDFAVLGLEE RDSGDVARRL GDEATFQNLA RRNIATLAKY RFTRIVSCDP
      481 HSFHVLKNEY GALGGDYQVL HHSTFIDELL RAGTLQPGRS KAGSVTYHDP CYLGRYNGEY
      541 EAPRNVLRAL GIEVKEMQRS GFRSRCCGGG GGAPITDIPG KQRIPDMRMA DIRETGAELV
      601 AVGCPQCTAM LEGVVAPRPE IKDIAELVAE ALIEQAEAPA KKPLRREAVA EVH
//