LOCUS QOD50474.1 402 aa PRT BCT 28-SEP-2020 DEFINITION Pseudomonas aeruginosa acyl-CoA dehydrogenase family protein protein. ACCESSION CP058257-5393 PROTEIN_ID QOD50474.1 SOURCE Pseudomonas aeruginosa ORGANISM Pseudomonas aeruginosa Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas. REFERENCE 1 (bases 1 to 6580692) AUTHORS Alamri,A.M. and Alnimr,A.M. TITLE Whole Genome Sequence of an extensively Drug resistant Pseudomonas aeruginosa JOURNAL Unpublished REFERENCE 2 (bases 1 to 6580692) AUTHORS Alamri,A.M. and Alnimr,A.M. TITLE Direct Submission JOURNAL Submitted (21-JUN-2020) Department of Clinical Laboratory Sciences, Imam Abdulrahman Bin Faisal University, Dammam 35211, Saudi Arabia COMMENT The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Date :: 20-JUN-2020 Assembly Method :: SOAPdenovo v. 1.05 Genome Representation :: Full Expected Final Version :: Yes Reference-guided Assembly :: NC_002516.2 Genome Coverage :: 100.0x Sequencing Technology :: Illumina HiSeq ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Date :: 06/29/2020 17:07:23 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 4.11 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA; repeat_region Genes (total) :: 6,083 CDSs (total) :: 6,023 Genes (coding) :: 5,942 CDSs (with protein) :: 5,942 Genes (RNA) :: 60 tRNAs :: 56 ncRNAs :: 4 Pseudo Genes (total) :: 81 CDSs (without protein) :: 81 Pseudo Genes (ambiguous residues) :: 6 of 81 Pseudo Genes (frameshifted) :: 33 of 81 Pseudo Genes (incomplete) :: 47 of 81 Pseudo Genes (internal stop) :: 7 of 81 Pseudo Genes (multiple problems) :: 10 of 81 CRISPR Arrays :: 3 ##Genome-Annotation-Data-END## FEATURES Qualifiers source /organism="Pseudomonas aeruginosa" /mol_type="genomic DNA" /strain="PA179" /isolation_source="blood" /host="Homo sapiens" /db_xref="taxon:287" /country="Saudi Arabia: Khobar" /lat_lon="26.217192 N 50.197140 E" /collection_date="2017" /collected_by="Aisha Alamri" protein /locus_tag="HWH41_27245" /inference="COORDINATES: similar to AA sequence:RefSeq:NP_253681.1" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /transl_table=11 BEGIN 1 MYLETPKKFR SLANQAHQVA ENYFRPISRK YDKAEHAYPK ELDLLAALLD GMNSGSPEAV 61 GATSASKRAG KQVEEGIKNG GNLSALLGVM ELCWGDVGLL LAMPRQGLGN AAIAAVANEE 121 QLQRFGGTWA AMAITEPGCG SDSAAIRTTA TQDGDHYVLN GEKIFVTSGE RADAVVVWAT 181 LNRNLGRAAI KSFVVEKGTP GMTVTRLEKK LGIKASDTAS ISFNDCRVPA ANLLGNAEVD 241 VQKGFAGVME TFDNTRPLVA GMAVGVAKAA LDRTRELLKK AGCKFDYRKP LLTVSHAEAT 301 LYRLEAEWEA ARLLTLKAAW MADNKLPNSK EASIAKAKAG RVANEITLKC VELAGALGYA 361 EDELLEKWAR DSKILDIFEG TQQIQLLIVA RRLLGKSSSQ LK //