LOCUS QOD50220.1 1089 aa PRT BCT 28-SEP-2020 DEFINITION Pseudomonas aeruginosa DUF748 domain-containing protein protein. ACCESSION CP058257-5130 PROTEIN_ID QOD50220.1 SOURCE Pseudomonas aeruginosa ORGANISM Pseudomonas aeruginosa Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas. REFERENCE 1 (bases 1 to 6580692) AUTHORS Alamri,A.M. and Alnimr,A.M. TITLE Whole Genome Sequence of an extensively Drug resistant Pseudomonas aeruginosa JOURNAL Unpublished REFERENCE 2 (bases 1 to 6580692) AUTHORS Alamri,A.M. and Alnimr,A.M. TITLE Direct Submission JOURNAL Submitted (21-JUN-2020) Department of Clinical Laboratory Sciences, Imam Abdulrahman Bin Faisal University, Dammam 35211, Saudi Arabia COMMENT The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Date :: 20-JUN-2020 Assembly Method :: SOAPdenovo v. 1.05 Genome Representation :: Full Expected Final Version :: Yes Reference-guided Assembly :: NC_002516.2 Genome Coverage :: 100.0x Sequencing Technology :: Illumina HiSeq ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Date :: 06/29/2020 17:07:23 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 4.11 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA; repeat_region Genes (total) :: 6,083 CDSs (total) :: 6,023 Genes (coding) :: 5,942 CDSs (with protein) :: 5,942 Genes (RNA) :: 60 tRNAs :: 56 ncRNAs :: 4 Pseudo Genes (total) :: 81 CDSs (without protein) :: 81 Pseudo Genes (ambiguous residues) :: 6 of 81 Pseudo Genes (frameshifted) :: 33 of 81 Pseudo Genes (incomplete) :: 47 of 81 Pseudo Genes (internal stop) :: 7 of 81 Pseudo Genes (multiple problems) :: 10 of 81 CRISPR Arrays :: 3 ##Genome-Annotation-Data-END## FEATURES Qualifiers source /organism="Pseudomonas aeruginosa" /mol_type="genomic DNA" /strain="PA179" /isolation_source="blood" /host="Homo sapiens" /db_xref="taxon:287" /country="Saudi Arabia: Khobar" /lat_lon="26.217192 N 50.197140 E" /collection_date="2017" /collected_by="Aisha Alamri" protein /locus_tag="HWH41_25905" /inference="COORDINATES: similar to AA sequence:RefSeq:NP_253423.1" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /transl_table=11 BEGIN 1 MPKGLKRAVS ALLITFLVYC LLGFLLIPGI GLRVANQQLA QYATVPARLE RIEFNPFSLE 61 LTLWGLRLGE EKNPQLAFRR LYANLQLDSL WKRQLHLADV ELEGPHTELL FDEKGQLNLA 121 SLFRIPPSES PEPEQPSDPF PLRIDRIQLA EGSLHFQDLR PSEPVDFSFD PLGFELHNLS 181 TLPDDGAKMT LLATGPNGGR LDWEGDLTLV PITSRGHLSV KDIQLKAWWP YVRDNAPLVL 241 ENGVVSLSSD YRLDLSKDTQ LLLDKAALKL ADFSINSPQG KPLAKLASLD VAATTLDLAK 301 QEVVLGEVRS QGLEAWAARE KDGQLDWQKL FADFTPPPRK APAPKPAENT DPAAAPTDAA 361 KTTREPATDG AAKAAAIASG EASKDRPAEK NASVAETERA TDDKESAKVA EGGAADKVAK 421 QETSEAPKTG KATGQETAKT AEVDKAASDS PQQLADTAKT PPPESTKAAA ETPAKPWHIV 481 LRDAQLRGYK AHLVDRQPAT EVPLEVGPLD LDLQNVDSLG KTPFDLKLKT GLGNRGQVQA 541 SGQVVLDPVS ARLKVSTRDI DLRVAQAYIS PFIRLELRSG FLGSELAVDL KSVEPLAFSV 601 DGSAEVSQLH TLDTIKDRDF VKWTKLTLNG LAYRHEDSLS IQSVSFEEPY ARFIINEDRS 661 TNVSELIIPQ PASSSGKAAA ESKNAPASKP LGIHIGGVRI NNGSANFADL TLMPPFGTAI 721 QQLSGEVGTL DTRNSQPAKV DIKGKVDKYA PVTIAGELDP FDPLKKLDIT TSFKRVELTT 781 LTPYSGKFAG YRIRKGRLNL DLHYQIERSQ LKAENKVLLE GLQLGEKVDS PDAVDLPVKL 841 AVALLKDTKG NIDIQLPVAG DLNNPEFSVM PIVWQTLRNL VLRAVQAPFK FIAGLAAGGN 901 EDLGTVPFAA GSDELTPEAQ ANLDKLADAL KERPALRLEV EGVASAAADG PSIGAKRLEL 961 EYQNTYYRML QRRGDKVPSD AKQLEVPENM QAPLLEGIYR TRLKQQPPAE WKELDSDERT 1021 AKMREAVIAS WAKSQVLLRQ IGQARATRIK DYLVEKGQLP DDRIYLIDVS FAEGEDKGNV 1081 DTQLHLDSE //