LOCUS       QOD50212.1               983 aa    PRT              BCT 28-SEP-2020
DEFINITION  Pseudomonas aeruginosa PAS domain S-box protein protein.
ACCESSION   CP058257-5120
PROTEIN_ID  QOD50212.1
SOURCE      Pseudomonas aeruginosa
  ORGANISM  Pseudomonas aeruginosa
            Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales;
            Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (bases 1 to 6580692)
  AUTHORS   Alamri,A.M. and Alnimr,A.M.
  TITLE     Whole Genome Sequence of an extensively Drug resistant Pseudomonas
            aeruginosa
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 6580692)
  AUTHORS   Alamri,A.M. and Alnimr,A.M.
  TITLE     Direct Submission
  JOURNAL   Submitted (21-JUN-2020) Department of Clinical Laboratory Sciences,
            Imam Abdulrahman Bin Faisal University, Dammam 35211, Saudi Arabia
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date             :: 20-JUN-2020
            Assembly Method           :: SOAPdenovo v. 1.05
            Genome Representation     :: Full
            Expected Final Version    :: Yes
            Reference-guided Assembly :: NC_002516.2
            Genome Coverage           :: 100.0x
            Sequencing Technology     :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 06/29/2020 17:07:23
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 6,083
            CDSs (total)                      :: 6,023
            Genes (coding)                    :: 5,942
            CDSs (with protein)               :: 5,942
            Genes (RNA)                       :: 60
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 81
            CDSs (without protein)            :: 81
            Pseudo Genes (ambiguous residues) :: 6 of 81
            Pseudo Genes (frameshifted)       :: 33 of 81
            Pseudo Genes (incomplete)         :: 47 of 81
            Pseudo Genes (internal stop)      :: 7 of 81
            Pseudo Genes (multiple problems)  :: 10 of 81
            CRISPR Arrays                     :: 3
            ##Genome-Annotation-Data-END##
FEATURES             Qualifiers
     source          /organism="Pseudomonas aeruginosa"
                     /mol_type="genomic DNA"
                     /strain="PA179"
                     /isolation_source="blood"
                     /host="Homo sapiens"
                     /db_xref="taxon:287"
                     /country="Saudi Arabia: Khobar"
                     /lat_lon="26.217192 N 50.197140 E"
                     /collection_date="2017"
                     /collected_by="Aisha Alamri"
     protein         /locus_tag="HWH41_25855"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_253413.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /transl_table=11
BEGIN
        1 MLTSFSLTQL ILISVAYLST LFGIAWITER GYVPRRLVRH PLVYTLSLGV YASAWAFYGT
       61 VGLAYQYGYG FLAIYLGISG AFLLAPVLLY PILRVTRAYQ LSSLADLFAF RFRSTWAGAL
      121 TTLFMLIGVL PMLALQIQAV TDSISILTRD PAQERVAFVF CTLITLFAIL FGARHIATRE
      181 RHEGLVFAIA FESLVKLVML GSIGLYALYG VFGGPEGLEV WLLQNQTALT TLHTPLAEGP
      241 WRTLLLVFFA AAIVMPHMFH MIFTENLNPR ALISASWGLP LFLLLMSLAV PPILWAGLRL
      301 GASTTPEYYT IGLGLAVDSP ALALAAFIGG ISAASGLTIV MTLALSGMVL NHLVLPLYQP
      361 PAQGNIYRWL KWTRRLLIVA IIMASYAFYL LLGAEQDLSN LGIVSFVATL QFLPGALSVL
      421 YWPTANRRGF ISGLIAGMLV WAITMLLPLM GNVQGLYLPL FDVIYVLDDS NWHLAALSSL
      481 AANVLVFTLV SLFTEASDEE KGAAEACAVD NVRRPQRREL FAGSPQEFAS QLAKPLGAKT
      541 AQKEVEQALR DLHLPFDERR PYALRRLRDR IEANLSGLMG PSVAQDIVET FLPYKTSEES
      601 YVTEDIHFIE SRLEDYHSRL TGLAAELDTL RRYHRQTLQD LPMGVCSLAK DQEVLMWNRA
      661 IEELTGVGAQ KVVGSRLSAL PEPWKGLLER FIDAPDEHLH KQRLVYDGHT RWLNLHKAAI
      721 EEPLAPGNSG LVLLVEDLTE TQLLEDKLVH SERLASIGRL AAGVAHEIGN PITGIACLAQ
      781 NLREEREGDG ELTEISEQIL DQTKRVSRIV QSLMSFAHSG SHLQALEPVC LSEVAQEAIG
      841 LLSLNRRSVE VEFFNLCDPA HWVEGDSQRL AQVLINLLSN ARDASPPGGA IRVRSEASEH
      901 TVDLVVEDEG SGIPKAIMDQ LFEPFFTTKD PGKGTGLGLA LVYSIVEEHY GQITIESPTD
      961 HQREGGTRFR VTLPRHPGPT AEL
//