LOCUS       QOD49781.1               923 aa    PRT              BCT 28-SEP-2020
DEFINITION  Pseudomonas aeruginosa PAS domain S-box protein protein.
ACCESSION   CP058257-4670
PROTEIN_ID  QOD49781.1
SOURCE      Pseudomonas aeruginosa
  ORGANISM  Pseudomonas aeruginosa
            Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales;
            Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (bases 1 to 6580692)
  AUTHORS   Alamri,A.M. and Alnimr,A.M.
  TITLE     Whole Genome Sequence of an extensively Drug resistant Pseudomonas
            aeruginosa
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 6580692)
  AUTHORS   Alamri,A.M. and Alnimr,A.M.
  TITLE     Direct Submission
  JOURNAL   Submitted (21-JUN-2020) Department of Clinical Laboratory Sciences,
            Imam Abdulrahman Bin Faisal University, Dammam 35211, Saudi Arabia
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date             :: 20-JUN-2020
            Assembly Method           :: SOAPdenovo v. 1.05
            Genome Representation     :: Full
            Expected Final Version    :: Yes
            Reference-guided Assembly :: NC_002516.2
            Genome Coverage           :: 100.0x
            Sequencing Technology     :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 06/29/2020 17:07:23
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 6,083
            CDSs (total)                      :: 6,023
            Genes (coding)                    :: 5,942
            CDSs (with protein)               :: 5,942
            Genes (RNA)                       :: 60
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 81
            CDSs (without protein)            :: 81
            Pseudo Genes (ambiguous residues) :: 6 of 81
            Pseudo Genes (frameshifted)       :: 33 of 81
            Pseudo Genes (incomplete)         :: 47 of 81
            Pseudo Genes (internal stop)      :: 7 of 81
            Pseudo Genes (multiple problems)  :: 10 of 81
            CRISPR Arrays                     :: 3
            ##Genome-Annotation-Data-END##
FEATURES             Qualifiers
     source          /organism="Pseudomonas aeruginosa"
                     /mol_type="genomic DNA"
                     /strain="PA179"
                     /isolation_source="blood"
                     /host="Homo sapiens"
                     /db_xref="taxon:287"
                     /country="Saudi Arabia: Khobar"
                     /lat_lon="26.217192 N 50.197140 E"
                     /collection_date="2017"
                     /collected_by="Aisha Alamri"
     protein         /locus_tag="HWH41_23565"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_252983.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /transl_table=11
BEGIN
        1 MFEFSRSSSA EAERPEPFSQ EGPSLWSASL RSWDLCFEMD EQDRVIRVGG RQAYRLQCAH
       61 GLGEQPRPFA EYLERRAPGA PTLAGLRRGE RLDLTLRSDA AAPLTCRFQP MQPLDGLGRS
      121 LLLGMDISDL NWQSDSQQHQ LQSLSLGKLI LSRLRHVSHG HLAEAVQEIL ESLSGAFQMQ
      181 AIALLLGDGK GFCTVFASHV RPGSDSLLRP TLQLADDDLR EGAGARLLRR GEGASTLLRQ
      241 IGEDALYLVP AAMRGGRLGA LLVRPMSLEQ LAQGPAPQDW QYLAELLANQ VADRCELHEQ
      301 HDSSRKLGLL QEMIGGGWWR YWAEQELFEL APALHDSLGL TGEYRRVPLE HLQGLLQPAD
      361 ADELGLRLRA SLRSGQALAQ DLCLRQPDSR GERRWLRIEG RLLGRGSALG LSGVLLDISE
      421 GRRQEERAQA AHARLRSLID SAPVVIYVQR VEQGHLVPEF YSESASNLLG LDLQGQSWQA
      481 LAERVHPDDL EAFFARGREL LREGRVKTRY RLADGQGNWH WLYDEAKLLH DAQGLPSEAV
      541 GLWLDVTEQH LAAQRIAESE ERYRVLVEDS PALICRYTAD LVLTYVNRTF ADSLATSPER
      601 LVGRRLDEWL AAEDASALRA RLLGSPREGA SEVPELRFNL PGQRFLWLVW AERPLFDARG
      661 ELCEVQAVGR DNTPVRRAQQ QLAQGAKMAS LGEMVSGLAH EVKQPLHVLR MTLFNMRQRM
      721 NSVGLDGDYL GEKLERMDAQ VLRVDRLVSH LGVFSRKSAL EALPFDPYTA FEGALGLLGE
      781 GLRQHAIEVE CPAPTQRMVV RGQADQLEQV IINLLANARD ALLGNPGLAS RRVRLEQVAC
      841 REPGWVELHV HDNGGGIEPL LLERIFEPFF TTKAEGKGTG LGLSVSHDLV RNMGGSLTAA
      901 NQGEGALFVV RLPLAALPAE AGG
//