LOCUS       QOD49225.1               667 aa    PRT              BCT 28-SEP-2020
DEFINITION  Pseudomonas aeruginosa TonB-dependent receptor protein.
ACCESSION   CP058257-4075
PROTEIN_ID  QOD49225.1
SOURCE      Pseudomonas aeruginosa
  ORGANISM  Pseudomonas aeruginosa
            Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales;
            Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (bases 1 to 6580692)
  AUTHORS   Alamri,A.M. and Alnimr,A.M.
  TITLE     Whole Genome Sequence of an extensively Drug resistant Pseudomonas
            aeruginosa
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 6580692)
  AUTHORS   Alamri,A.M. and Alnimr,A.M.
  TITLE     Direct Submission
  JOURNAL   Submitted (21-JUN-2020) Department of Clinical Laboratory Sciences,
            Imam Abdulrahman Bin Faisal University, Dammam 35211, Saudi Arabia
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date             :: 20-JUN-2020
            Assembly Method           :: SOAPdenovo v. 1.05
            Genome Representation     :: Full
            Expected Final Version    :: Yes
            Reference-guided Assembly :: NC_002516.2
            Genome Coverage           :: 100.0x
            Sequencing Technology     :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 06/29/2020 17:07:23
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 6,083
            CDSs (total)                      :: 6,023
            Genes (coding)                    :: 5,942
            CDSs (with protein)               :: 5,942
            Genes (RNA)                       :: 60
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 81
            CDSs (without protein)            :: 81
            Pseudo Genes (ambiguous residues) :: 6 of 81
            Pseudo Genes (frameshifted)       :: 33 of 81
            Pseudo Genes (incomplete)         :: 47 of 81
            Pseudo Genes (internal stop)      :: 7 of 81
            Pseudo Genes (multiple problems)  :: 10 of 81
            CRISPR Arrays                     :: 3
            ##Genome-Annotation-Data-END##
FEATURES             Qualifiers
     source          /organism="Pseudomonas aeruginosa"
                     /mol_type="genomic DNA"
                     /strain="PA179"
                     /isolation_source="blood"
                     /host="Homo sapiens"
                     /db_xref="taxon:287"
                     /country="Saudi Arabia: Khobar"
                     /lat_lon="26.217192 N 50.197140 E"
                     /collection_date="2017"
                     /collected_by="Aisha Alamri"
     protein         /locus_tag="HWH41_20570"
                     /inference="COORDINATES: protein
                     motif:HMM:NF012801.1,HMM:NF019335.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /transl_table=11
BEGIN
        1 MQNLLSNRLV PSLALSLLGA ATAQAETPIA LPDMEVSTWG NSLSPPDSVA REDFQRFDRR
       61 DVGEALNTLP GVYLQGGGNR NERQVSVRGF DSRQVPLFID GVPVYVPYDG NIDLGRFLTS
      121 DLAGIEVSKG YASLLQGPNM LGGAINLATR RPTRPFEAGF GLSQGWARDA GRVGRAADFS
      181 LGGKGRQGFF QASGAWLDRD ARALPGGLRD SDDLGSHGER ANSASRDARG TLKLGLTPNA
      241 SDEYVLTYFK QDGDKQSPPY AGSDPSFQSR YWRWPDWNKE GLYFNSSTQL GERTRLRTRL
      301 YRDTFQNTLE QYNSRADLEA RKGSRSQYDD WSDGAGVELS QGLREDDSLA FALHWKQDVH
      361 RERQDRGPWG RFEDRTWSLS SEYQWALDAA TRMIFGVSYD WRESLEAREY KTDRQGRTSE
      421 KEYPDNDAEA FNWQWSLVHP LDEASEVQLN LADRSRFATL KDRYTTFRPA VGQTVLVNPD
      481 LDPERARLVE LRYRRAFGQD TTLDLALFHN RVRDAIQATD LGPNLAQNRN VGEIVYQGLD
      541 LGLRGRPAQR LELGANYSWI DSDWRSSEAG VVTGLPRHKL FAWADWQALE PLHLVLSGEA
      601 RSRTYSDTGG SRRAAGFALL NLHGEYQASR ELALSLALNN LADRRYAYNE GFIEEGRTLW
      661 LGMKYRY
//