LOCUS       QOD48881.1              1053 aa    PRT              BCT 28-SEP-2020
DEFINITION  Pseudomonas aeruginosa multidrug efflux RND transporter
            permease subunit MexQ protein.
ACCESSION   CP058257-3720
PROTEIN_ID  QOD48881.1
SOURCE      Pseudomonas aeruginosa
  ORGANISM  Pseudomonas aeruginosa
            Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales;
            Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (bases 1 to 6580692)
  AUTHORS   Alamri,A.M. and Alnimr,A.M.
  TITLE     Whole Genome Sequence of an extensively Drug resistant Pseudomonas
            aeruginosa
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 6580692)
  AUTHORS   Alamri,A.M. and Alnimr,A.M.
  TITLE     Direct Submission
  JOURNAL   Submitted (21-JUN-2020) Department of Clinical Laboratory Sciences,
            Imam Abdulrahman Bin Faisal University, Dammam 35211, Saudi Arabia
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date             :: 20-JUN-2020
            Assembly Method           :: SOAPdenovo v. 1.05
            Genome Representation     :: Full
            Expected Final Version    :: Yes
            Reference-guided Assembly :: NC_002516.2
            Genome Coverage           :: 100.0x
            Sequencing Technology     :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 06/29/2020 17:07:23
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 6,083
            CDSs (total)                      :: 6,023
            Genes (coding)                    :: 5,942
            CDSs (with protein)               :: 5,942
            Genes (RNA)                       :: 60
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 81
            CDSs (without protein)            :: 81
            Pseudo Genes (ambiguous residues) :: 6 of 81
            Pseudo Genes (frameshifted)       :: 33 of 81
            Pseudo Genes (incomplete)         :: 47 of 81
            Pseudo Genes (internal stop)      :: 7 of 81
            Pseudo Genes (multiple problems)  :: 10 of 81
            CRISPR Arrays                     :: 3
            ##Genome-Annotation-Data-END##
FEATURES             Qualifiers
     source          /organism="Pseudomonas aeruginosa"
                     /mol_type="genomic DNA"
                     /strain="PA179"
                     /isolation_source="blood"
                     /host="Homo sapiens"
                     /db_xref="taxon:287"
                     /country="Saudi Arabia: Khobar"
                     /lat_lon="26.217192 N 50.197140 E"
                     /collection_date="2017"
                     /collected_by="Aisha Alamri"
     protein         /gene="mexQ"
                     /locus_tag="HWH41_18790"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_252212.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /transl_table=11
BEGIN
        1 MTFPRFFIDR PIFAIVLSVL MMIGGIVSFF QLPLSEYPAV TPPTVQVTTA YPGANPDVIA
       61 QTVATPLEQA ITGVEGMLYM SSQSATDGRM ILTITFDQHI DPDMAQIQVQ NRVSRVLSRL
      121 PDEVQRQGVV TQKTSPDILM VVHLLSPEQR YDPLYISNYA YLQVRDELLR LPGISDVVVW
      181 GAGEYSMRLW LDPDLIAARG LTAGEVIAAV REQNVQVAAG AVGQAPDSTA AFQVTVNTLG
      241 RLSDEEQFGD IIVRTGADGQ VTRLRDVARI EMGGDAYALR SLLDGEPAVA LQIVQSPGAN
      301 ALDTAEAVRA IVARLEGNFP AGLSARIAYD PTVFVRASLQ TVATTLLEAI LLVVVVVVLF
      361 LRSWRASLIP LMAVPVSLVG TFAIMHLMGF SLNTLSLFGL VLSIGIVVDD AIVVVENVER
      421 HIENGEPPLQ AARRAMDEVT GPIMAITSVL AAVFIPTAFL SGLQGEFYRQ FALTIAISTI
      481 LSALNSLTLS PALAGLLLRP RPAGDAVAGR FQRLLQALGR PLRNAPEAYG NAVRKVVRVS
      541 GLALVVYGGL LGLTWVGFQA VPPGFVPMQD KYYLVGIAQL PNGASLERTD AVVRQMSRIG
      601 LEEPGVESVV AFPGLSVNGF VNVPNAAVMF FMLDPFESRT SADLGALAIA GRLQARFASI
      661 PDGFLGVFPP PPVPGLGTIG GFKMQVEDRG GAGLEALARQ TQVLMMKATE SGQLGGLMTS
      721 FDINAPQLEV VVDRTKVKSQ GVRLADVFEA LQVYLGSLYI NDFNRFGRTY KVTAQADAPH
      781 RMQAEAIGRL QVRNAAGAML PLSSFVTVTP SSGPDRVIHY NGYPSADISG GALPGVSSGQ
      841 AVALMERLAG EVLPEGMTFE WTDLTYQQKL AGNSALFIFP LCVLLAYLIL AAQYNSWLLP
      901 LAVLLIVPMC LLSAIAGVWL VGGDNNVFVQ IGLVVLVGLA AKNAILIVEF ARTLEAEGAR
      961 ALEAVVEACR LRLRPILMTS LAFIAGVVPL VMASGAGAEM RQAMGVAVFA GMLGVTLFGL
     1021 FLTPVFYVLV RALAARLEPR AGGSLAHLEG GRP
//