LOCUS QOD48858.1 678 aa PRT BCT 28-SEP-2020 DEFINITION Pseudomonas aeruginosa methionine--tRNA ligase protein. ACCESSION CP058257-3696 PROTEIN_ID QOD48858.1 SOURCE Pseudomonas aeruginosa ORGANISM Pseudomonas aeruginosa Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas. REFERENCE 1 (bases 1 to 6580692) AUTHORS Alamri,A.M. and Alnimr,A.M. TITLE Whole Genome Sequence of an extensively Drug resistant Pseudomonas aeruginosa JOURNAL Unpublished REFERENCE 2 (bases 1 to 6580692) AUTHORS Alamri,A.M. and Alnimr,A.M. TITLE Direct Submission JOURNAL Submitted (21-JUN-2020) Department of Clinical Laboratory Sciences, Imam Abdulrahman Bin Faisal University, Dammam 35211, Saudi Arabia COMMENT The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Date :: 20-JUN-2020 Assembly Method :: SOAPdenovo v. 1.05 Genome Representation :: Full Expected Final Version :: Yes Reference-guided Assembly :: NC_002516.2 Genome Coverage :: 100.0x Sequencing Technology :: Illumina HiSeq ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Date :: 06/29/2020 17:07:23 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 4.11 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA; repeat_region Genes (total) :: 6,083 CDSs (total) :: 6,023 Genes (coding) :: 5,942 CDSs (with protein) :: 5,942 Genes (RNA) :: 60 tRNAs :: 56 ncRNAs :: 4 Pseudo Genes (total) :: 81 CDSs (without protein) :: 81 Pseudo Genes (ambiguous residues) :: 6 of 81 Pseudo Genes (frameshifted) :: 33 of 81 Pseudo Genes (incomplete) :: 47 of 81 Pseudo Genes (internal stop) :: 7 of 81 Pseudo Genes (multiple problems) :: 10 of 81 CRISPR Arrays :: 3 ##Genome-Annotation-Data-END## FEATURES Qualifiers source /organism="Pseudomonas aeruginosa" /mol_type="genomic DNA" /strain="PA179" /isolation_source="blood" /host="Homo sapiens" /db_xref="taxon:287" /country="Saudi Arabia: Khobar" /lat_lon="26.217192 N 50.197140 E" /collection_date="2017" /collected_by="Aisha Alamri" protein /gene="metG" /locus_tag="HWH41_18670" /EC_number="6.1.1.10" /inference="COORDINATES: similar to AA sequence:RefSeq:NP_252172.1" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /transl_table=11 BEGIN 1 MSEPRKILVT SALPYANGSI HLGHMLEYIQ TDMWVRFQKM RGNQAVYVCA DDAHGSAIML 61 RAEREGITSE QLIDAVRAEH MGDFADFLVD FDNYHSTHSE ENRELSSAIY LKLRDAGHID 121 TRPVTQYFDP EKQMFLADRF IKGTCPKCGT ADQYGDNCEA CGATYAPTEL KDPKSAISGA 181 TPVLKESLHY FFKLPDFEAM LKQWTRSGAL QESVANKLAE WLDSGLQQWD ISRDAPYFGF 241 EIPDAPGKYF YVWLDAPIGY MASFKNLCAR RPELDFDAFW GKDSSAELYH FIGKDIVNFH 301 ALFWPAMLEG AGYRKPTALN VHGYLTVNGQ KMSKSRGTFV KARTYLDHLD PEYLRYYYAS 361 KLGRGVEDLD LNLEDFVQKV NSDLVGKVVN IASRCAGFIH KGNAGVLVGA DPAPELLAAF 421 REAAPGIAEA YEARDFNRAM REIMALADRA NAWIAEQAPW ALAKQEGQQD KVQAVCGLGI 481 NLFRQLVIFL KPVLPKLAAA AEAFLNVAPL TWADHRTLLA NHQLNPFQPL MTRIEPAKVE 541 AMIEASKEDL AAAASQPAGN GELVKEPIAA EIDFDAFAAV DLRIALIEKC EFVEGADKLL 601 RLSLDIGDAK RNVFSGIKSA YPDPSALEGR LTLYVANLAP RKMKFGVSEG MVLAAGPGGE 661 EIYLLSPDSG AKPGQRVK //