LOCUS       QOD47785.1              1076 aa    PRT              BCT 28-SEP-2020
DEFINITION  Pseudomonas aeruginosa type I-F CRISPR-associated helicase
            Cas3 protein.
ACCESSION   CP058257-2582
PROTEIN_ID  QOD47785.1
SOURCE      Pseudomonas aeruginosa
  ORGANISM  Pseudomonas aeruginosa
            Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales;
            Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (bases 1 to 6580692)
  AUTHORS   Alamri,A.M. and Alnimr,A.M.
  TITLE     Whole Genome Sequence of an extensively Drug resistant Pseudomonas
            aeruginosa
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 6580692)
  AUTHORS   Alamri,A.M. and Alnimr,A.M.
  TITLE     Direct Submission
  JOURNAL   Submitted (21-JUN-2020) Department of Clinical Laboratory Sciences,
            Imam Abdulrahman Bin Faisal University, Dammam 35211, Saudi Arabia
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date             :: 20-JUN-2020
            Assembly Method           :: SOAPdenovo v. 1.05
            Genome Representation     :: Full
            Expected Final Version    :: Yes
            Reference-guided Assembly :: NC_002516.2
            Genome Coverage           :: 100.0x
            Sequencing Technology     :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 06/29/2020 17:07:23
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.11
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 6,083
            CDSs (total)                      :: 6,023
            Genes (coding)                    :: 5,942
            CDSs (with protein)               :: 5,942
            Genes (RNA)                       :: 60
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 81
            CDSs (without protein)            :: 81
            Pseudo Genes (ambiguous residues) :: 6 of 81
            Pseudo Genes (frameshifted)       :: 33 of 81
            Pseudo Genes (incomplete)         :: 47 of 81
            Pseudo Genes (internal stop)      :: 7 of 81
            Pseudo Genes (multiple problems)  :: 10 of 81
            CRISPR Arrays                     :: 3
            ##Genome-Annotation-Data-END##
FEATURES             Qualifiers
     source          /organism="Pseudomonas aeruginosa"
                     /mol_type="genomic DNA"
                     /strain="PA179"
                     /isolation_source="blood"
                     /host="Homo sapiens"
                     /db_xref="taxon:287"
                     /country="Saudi Arabia: Khobar"
                     /lat_lon="26.217192 N 50.197140 E"
                     /collection_date="2017"
                     /collected_by="Aisha Alamri"
     protein         /gene="cas3f"
                     /locus_tag="HWH41_12990"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014602883.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /transl_table=11
BEGIN
        1 MNILLVSQCE KRALSETRRI LDQFAERRGE RTWQTPITQA GLDTLRRLLK KSARRNTAVA
       61 CHWIRGRDHS ELLWIVGDAS RFNAQGAVPT NRTCRDILRK EDENDWHSAE DIRLLTVMAA
      121 LFHDIGKASQ AFQAKLRNRG KPMADAYRHE WVSLRLFEAF VGPGSSDEDW LRRLADKRET
      181 GDAWLSQLAR DDRQSAPPGP FQKSRLPPLA QAVGWLIVSH HRLPNGDHRG SASLARLPAP
      241 IQSQWCGARD ADAKEKAACW QFPHGLPFAS AHWRARTALC AQSMLERPGL LARGPALLHD
      301 SYVMHVSRLI LMLADHHYSS LPADSRLGDP NFPLHANTDR DSGKLKQRLD EHLLGVALHS
      361 RKLAGTLPRL ERQLPRLARH KGFTRRVEQP RFRWQDKAYD CAMACREQAM EHGFFGLNLA
      421 STGCGKTLAN GRILYALADP QRGARFSIAL GLRSLTLQTG QAYRERLGLG DDDLAILVGG
      481 SAARELFEKQ QERLERSGSE SAQELLAENS HVHFAGTLED GPLREWLGRN SAGNRLLQAP
      541 ILACTIDHLM PASESLRGGH QIAPLLRLMT SDLVLDEVDD FDIDDLPALS RLVHWAGLFG
      601 SRVLLSSATL PPALVQGLFE AYRSGREIFQ RHRGAPGRAT EIRCAWFDEF SSQSSAHGAV
      661 TSFSEAHATF VAQRLAKLEQ LPPRRQAQLC TVHAAGEARP ALCRELAGQM NTWMADLHRC
      721 HHTEHQGRRI SFGLLRLANI EPLIELAQAI LAQGAPEGLH VHLCVYHSRH PLLVRSAIER
      781 QLDELLKRSD DDAAALFARP TLAKALQAST ERDHLFVVLA SPVAEVGRDH DYDWAIVEPS
      841 SMRSIIQLAG RIRRHRSGFS GEANLYLLSR NIRSLEGQNP AFQRPGFETP DFPLDSHDLH
      901 DLLDPALLAR IDASPRIVEP FPLFPRSRLV DLEHRRLRAL MLADDPPTSL LGVPLWWQTP
      961 ASLSGALQTS QPFRAGAKER CYALLPNEDD EERLHFSRYE EGTWSNQDNL LRNLDLTYGP
     1021 RIQTWGTVNY REELVAMAGR EDLDLRQCAM RYGEVRLREN TQGWSYHPYL GFKKYN
//