LOCUS QOD46190.1 1041 aa PRT BCT 28-SEP-2020 DEFINITION Pseudomonas aeruginosa penicillin-binding protein protein. ACCESSION CP058257-904 PROTEIN_ID QOD46190.1 SOURCE Pseudomonas aeruginosa ORGANISM Pseudomonas aeruginosa Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas. REFERENCE 1 (bases 1 to 6580692) AUTHORS Alamri,A.M. and Alnimr,A.M. TITLE Whole Genome Sequence of an extensively Drug resistant Pseudomonas aeruginosa JOURNAL Unpublished REFERENCE 2 (bases 1 to 6580692) AUTHORS Alamri,A.M. and Alnimr,A.M. TITLE Direct Submission JOURNAL Submitted (21-JUN-2020) Department of Clinical Laboratory Sciences, Imam Abdulrahman Bin Faisal University, Dammam 35211, Saudi Arabia COMMENT The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Date :: 20-JUN-2020 Assembly Method :: SOAPdenovo v. 1.05 Genome Representation :: Full Expected Final Version :: Yes Reference-guided Assembly :: NC_002516.2 Genome Coverage :: 100.0x Sequencing Technology :: Illumina HiSeq ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Date :: 06/29/2020 17:07:23 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 4.11 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA; repeat_region Genes (total) :: 6,083 CDSs (total) :: 6,023 Genes (coding) :: 5,942 CDSs (with protein) :: 5,942 Genes (RNA) :: 60 tRNAs :: 56 ncRNAs :: 4 Pseudo Genes (total) :: 81 CDSs (without protein) :: 81 Pseudo Genes (ambiguous residues) :: 6 of 81 Pseudo Genes (frameshifted) :: 33 of 81 Pseudo Genes (incomplete) :: 47 of 81 Pseudo Genes (internal stop) :: 7 of 81 Pseudo Genes (multiple problems) :: 10 of 81 CRISPR Arrays :: 3 ##Genome-Annotation-Data-END## FEATURES Qualifiers source /organism="Pseudomonas aeruginosa" /mol_type="genomic DNA" /strain="PA179" /isolation_source="blood" /host="Homo sapiens" /db_xref="taxon:287" /country="Saudi Arabia: Khobar" /lat_lon="26.217192 N 50.197140 E" /collection_date="2017" /collected_by="Aisha Alamri" protein /locus_tag="HWH41_04535" /inference="COORDINATES: similar to AA sequence:RefSeq:NP_249479.1" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /transl_table=11 BEGIN 1 MNCAATGGAS MGASERSTND PSELQPCSLP ASASPRKSRL RQRLMLIGFA LPILAAVGIV 61 VLHEAHTSRL QARELARYAA TLDYEVRQGP SEAILFPADG PFDRRLGYQL LPSFMQRLYD 121 RDYAITRQAH FSPALMRYAE HRLFPPYAEK AQAGLDIADC RGVPIYDFRY PQRRYANFAS 181 LPPLAVQSLL FIENRDLLDH ERPYLNPAVD WGRFTQAALS QVGKMLGFSA HSSGGSTLAT 241 QIEKYRHSAE GRTGSIGDKL RQMLSASVRS YREGPANFAA RQDIVLTYLN SVPLSAAPGY 301 GEVTGLADGL WVWYGADYRQ VGEALDGKAG LAAQGLALRQ VLALMIAHRR PSFYLAPRGR 361 DELDRMTDSH LRVLTQAGVI EAPLRDAALA QKLAFRDPRS QPTVQPLPTN KGVTLARTRL 421 AGMLGVPLYD LDRLDLRANT TLQHELQESV TAYLQKLADP DYAAQLGLIG ERLLTPTSTR 481 SVRYSFTLFE RTPSGNQVRV QTDNTDQPFD INEGSKLELG STAKLRVLAS YLETVAQIHR 541 DYGGMSVAEL RKVEVEPLDF ILRWGIDHLV ASRDRDLSAM LQAAMERRYS ASPYESFFTG 601 GGLHTFNNFR KEDNGRRPML LEALRESINL PFVRLLRDLI RHDIYQNAGS KVQLLADDKD 661 PRRADYLDRF VDKESQVYLR RFWVKYRDKD ANQRLETFLD GLRPWPVRLA AIHRYLQPQA 721 DLASFSAFLR ERLPRGSLTD KRAAELYERY GPGKFNLNDQ GYVARVHPLE LWLLGYLQKQ 781 PQATFGEAVA ASGAERKEVY GWLFKSRHKN ARDKRIRILL EVEAFLDLHQ QWKKLGYPFD 841 HLVPSYATAL GSSGDRPAAL AELMGIIVND GVRMPTLRLE HLDFALGTPY ETRFAPEATL 901 GQRVMTSEVA ATLRNALSQV VDAGTARRLQ GTFSRPDGAP LVMGGKTGTG DNRLQTFSAG 961 GHVRSSKALN RTATFVFYIG PRHFGTLTAY VDGSESSQFK FTSALPVQVL KGMAPLLRDY 1021 LDPRTATRCQ VPLSPQQIGR L //