LOCUS QEO16109.1 547 aa PRT BCT 10-SEP-2019 DEFINITION Agromyces intestinalis glycoside hydrolase family 13 protein protein. ACCESSION CP043505-1291 PROTEIN_ID QEO16109.1 SOURCE Agromyces intestinalis ORGANISM Agromyces intestinalis Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Agromyces. REFERENCE 1 (bases 1 to 3800200) AUTHORS Heo,J., Kim,S.-J., Kim,J.-S., Hong,S.-B. and Kwon,S.-W. TITLE Genome sequencing of strain KACC 19306 JOURNAL Unpublished REFERENCE 2 (bases 1 to 3800200) AUTHORS Heo,J., Kim,S.-J., Kim,J.-S., Hong,S.-B. and Kwon,S.-W. TITLE Direct Submission JOURNAL Submitted (01-SEP-2019) Agricultural Mircrobiology Division, National Institute of Agricultural Sciences, 166 Nongsaengmyeong-ro, Iseo-myeon, Wanju-gun, Jeollabuk-do 55365, Korea, Republic of COMMENT The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ This genome has a base modification file available. ##Genome-Assembly-Data-START## Assembly Date :: AUG-2019 Assembly Method :: RS HGAP Assembly v. 3.0 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 174.0x Sequencing Technology :: PacBio RSII; Illumina HiSeq ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Date :: 09/03/2019 16:08:18 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 4.9 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA; repeat_region Genes (total) :: 3,466 CDSs (total) :: 3,410 Genes (coding) :: 3,349 CDSs (with protein) :: 3,349 Genes (RNA) :: 56 rRNAs :: 2, 2, 2 (5S, 16S, 23S) complete rRNAs :: 2, 2, 2 (5S, 16S, 23S) tRNAs :: 47 ncRNAs :: 3 Pseudo Genes (total) :: 61 CDSs (without protein) :: 61 Pseudo Genes (ambiguous residues) :: 0 of 61 Pseudo Genes (frameshifted) :: 7 of 61 Pseudo Genes (incomplete) :: 55 of 61 Pseudo Genes (internal stop) :: 0 of 61 Pseudo Genes (multiple problems) :: 1 of 61 ##Genome-Annotation-Data-END## FEATURES Qualifiers source /organism="Agromyces intestinalis" /mol_type="genomic DNA" /strain="KACC 19306" /isolation_source="gut of larva" /host="Protaetia brevitarsis seulensis" /culture_collection="KACC:19306" /type_material="type strain of Agromyces intestinalis" /db_xref="taxon:2592652" /country="South Korea: Jeonju" /collection_date="2017" /collected_by="Soo-Jin Kim, Soon-Wo Kwon" /identified_by="Soo-Jin Kim, Jun Heo, Soon-Wo Kwon" protein /locus_tag="FLP10_06545" /inference="COORDINATES: similar to AA sequence:RefSeq:WP_012922248.1" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /transl_table=11 BEGIN 1 MADAPWWADA VVYQVYVRSF ADANGDGTGD LEGVLAHLDH LESLGVDAIW FTPWYASPMA 61 DGGYDVADYR AIDPAFGDLA TAERLIAEAS ARGIRTIVDI VPNHVSDRHP WFRAALAAEP 121 GSDERARFWF RPGRGACGEL PPTEWISSFG GPTWTRTTDP DGRPGEWYLH VFSPAQPDLN 181 WDHPAVRAEH EDVLRFWFDR GAAGIRVDSA AMLVKDASLP VAPAAAGDPD HPHLDRDGVH 241 EIYRAWRAVA DEYDDPRLLV GEVWLADPAR FARYLRDDEL HGAFNFEFMT KPWDASALRA 301 TIAETLDWHE GLSATPTWAL SNHDLTRPAT RYGRADSSFS FEQKRFGTPT DHARGLARAR 361 AAAMLAAFLP GSLYIYQGDE LGLPEVEDLP DELRQDPMFA RSGGVDPGRD GCRVPLPWTR 421 AGASLGFSPT GAAWLPQPAE WAGLSVEAQA RDEASTLSLY RRMLRLRRDL VREGRNGASP 481 TGFAWAEHPD PDVIALRRGD ILHLTNLGSR PAALPPHRDL LLASAPDARN HLERKELPAD 541 TSVWLRT //