LOCUS       QEO15364.1              1326 aa    PRT              BCT 10-SEP-2019
DEFINITION  Agromyces intestinalis ATP-dependent RNA helicase HrpA protein.
ACCESSION   CP043505-2707
PROTEIN_ID  QEO15364.1
SOURCE      Agromyces intestinalis
  ORGANISM  Agromyces intestinalis
            Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae;
            Agromyces.
REFERENCE   1  (bases 1 to 3800200)
  AUTHORS   Heo,J., Kim,S.-J., Kim,J.-S., Hong,S.-B. and Kwon,S.-W.
  TITLE     Genome sequencing of strain KACC 19306
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 3800200)
  AUTHORS   Heo,J., Kim,S.-J., Kim,J.-S., Hong,S.-B. and Kwon,S.-W.
  TITLE     Direct Submission
  JOURNAL   Submitted (01-SEP-2019) Agricultural Mircrobiology Division,
            National Institute of Agricultural Sciences, 166
            Nongsaengmyeong-ro, Iseo-myeon, Wanju-gun, Jeollabuk-do 55365,
            Korea, Republic of
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            This genome has a base modification file available.
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: AUG-2019
            Assembly Method        :: RS HGAP Assembly v. 3.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 174.0x
            Sequencing Technology  :: PacBio RSII; Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 09/03/2019 16:08:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.9
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,466
            CDSs (total)                      :: 3,410
            Genes (coding)                    :: 3,349
            CDSs (with protein)               :: 3,349
            Genes (RNA)                       :: 56
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 47
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 61
            CDSs (without protein)            :: 61
            Pseudo Genes (ambiguous residues) :: 0 of 61
            Pseudo Genes (frameshifted)       :: 7 of 61
            Pseudo Genes (incomplete)         :: 55 of 61
            Pseudo Genes (internal stop)      :: 0 of 61
            Pseudo Genes (multiple problems)  :: 1 of 61
            ##Genome-Annotation-Data-END##
FEATURES             Qualifiers
     source          /organism="Agromyces intestinalis"
                     /mol_type="genomic DNA"
                     /strain="KACC 19306"
                     /isolation_source="gut of larva"
                     /host="Protaetia brevitarsis seulensis"
                     /culture_collection="KACC:19306"
                     /type_material="type strain of Agromyces intestinalis"
                     /db_xref="taxon:2592652"
                     /country="South Korea: Jeonju"
                     /collection_date="2017"
                     /collected_by="Soo-Jin Kim, Soon-Wo Kwon"
                     /identified_by="Soo-Jin Kim, Jun Heo, Soon-Wo Kwon"
     protein         /gene="hrpA"
                     /locus_tag="FLP10_13705"
                     /EC_number="3.6.4.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017886965.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /transl_table=11
BEGIN
        1 MPAAIPVISY PPELPVSAQR EEIARAIRDH QVVIVAGATG SGKTTQLPKI CLELGRTSIA
       61 HTQPRRIAAR TIAERVAEEL GDEVGGLVGY QVRFTDRVSE STVIKVMTDG ILLNEIHRDR
      121 ELRRYDTIII DEAHERSLNI DFLLGYLKRL LPRRPDLKVI VTSATIDPES FARHFADASE
      181 RPAPVIEVSG RTYPVEVRYR PLVADAGASD ASDDDEGAAA EDRDVQRGIL DALDELDREA
      241 PGDVLVFLSG EGEIRDAEQA VRAHTTRRGA AGLTEVLPLY GRLSSADQHR VFEPSKVPGV
      301 RRRVVLATNV AETSLTVPGI RYVIDAGTAR ISRYSTRSKV QRLPIEPISQ ASANQRSGRS
      361 GRTSDGIAIR LYSEDDYDRR PEYTDPEILR TNLAAVILQM ASLGLGAVEE FPFLTPPDAR
      421 GVRDGVELLR ELGAIDDGGI EREGPRLTRI GRQLARLPIE PRFGRMVLES KAQGVSREVL
      481 AIVAGLTIQD PRERPLEQRE QATAAHARFV DPTSDFLTLL NLWNHLEERQ RELSGSAFRR
      541 LCKAEYLNYL RVREWQDLYR QLVRLAKPLG LHVAASTGSA GGVAPNPDGI HRALLAGLLS
      601 QLGIRDDART SSGRGGAGQA REAERKGRRQ IAEFLGARGT RFAVFPGSAL AKKPPQALMS
      661 AELVETSRLF ARMNAAIDPA WAEPLAGPLA KRSFSSPRWE RKQGAAVADE KVVLFGVPIV
      721 PKRRIQLARV DAALARDLFI RHALVEEDWD WSTLDRRVFA FVRRNRDLRR ELGELEERTR
      781 RRDILVGDEA VVAFYEARVP ADVTDTRAFE RWWRGEQRRQ PDLLTMTAAD LLGEVPETRD
      841 DGFPDRWRQG DQTLRLAYRF EPGADDDGVT VIVPLVLLPR LDATGFDWQV PGLRDELVTA
      901 MLRTLPKVLR RQVVPAAEWA AKISAELPAG PEGGEAREPF ADVVAKTIRA LTFAPVDPSD
      961 FDLDRVPPHL RVTFRAVDDR GRTAGSDKDL AALQARLADR AGKAVAATFG RSDAAAARRD
     1021 GGRRGPVASD LPDDTGGFTE ATGRTAWEWD ALPAHVDTRR GGNVVRAYPA VVDDGASVSL
     1081 RLLPTAEERD RASRRGIRRL LVLATPSPVA YVQEHLSNEE KLALAASAYA GPRALLDDAL
     1141 LAVVDAELRA RHPDGLLRTR AEFDAVRDAV AAVVMDRMFE TAALAARILK LAREADKAIS
     1201 KAASLTLMSP LADARSQLES LVPVGFISAT GLERLRHLPR YLEAIILRVR KLQGDPGRDR
     1261 RSLTEVEEAT KAFADAGGRI PIDPDADPRL VRARWMLEEL RVSLFAQELR TAEAVSIQRI
     1321 RKALSS
//