LOCUS QEO15146.1 1892 aa PRT BCT 10-SEP-2019 DEFINITION Agromyces intestinalis DUF11 domain-containing protein protein. ACCESSION CP043505-2473 PROTEIN_ID QEO15146.1 SOURCE Agromyces intestinalis ORGANISM Agromyces intestinalis Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Agromyces. REFERENCE 1 (bases 1 to 3800200) AUTHORS Heo,J., Kim,S.-J., Kim,J.-S., Hong,S.-B. and Kwon,S.-W. TITLE Genome sequencing of strain KACC 19306 JOURNAL Unpublished REFERENCE 2 (bases 1 to 3800200) AUTHORS Heo,J., Kim,S.-J., Kim,J.-S., Hong,S.-B. and Kwon,S.-W. TITLE Direct Submission JOURNAL Submitted (01-SEP-2019) Agricultural Mircrobiology Division, National Institute of Agricultural Sciences, 166 Nongsaengmyeong-ro, Iseo-myeon, Wanju-gun, Jeollabuk-do 55365, Korea, Republic of COMMENT The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ This genome has a base modification file available. ##Genome-Assembly-Data-START## Assembly Date :: AUG-2019 Assembly Method :: RS HGAP Assembly v. 3.0 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 174.0x Sequencing Technology :: PacBio RSII; Illumina HiSeq ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Date :: 09/03/2019 16:08:18 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 4.9 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA; repeat_region Genes (total) :: 3,466 CDSs (total) :: 3,410 Genes (coding) :: 3,349 CDSs (with protein) :: 3,349 Genes (RNA) :: 56 rRNAs :: 2, 2, 2 (5S, 16S, 23S) complete rRNAs :: 2, 2, 2 (5S, 16S, 23S) tRNAs :: 47 ncRNAs :: 3 Pseudo Genes (total) :: 61 CDSs (without protein) :: 61 Pseudo Genes (ambiguous residues) :: 0 of 61 Pseudo Genes (frameshifted) :: 7 of 61 Pseudo Genes (incomplete) :: 55 of 61 Pseudo Genes (internal stop) :: 0 of 61 Pseudo Genes (multiple problems) :: 1 of 61 ##Genome-Annotation-Data-END## FEATURES Qualifiers source /organism="Agromyces intestinalis" /mol_type="genomic DNA" /strain="KACC 19306" /isolation_source="gut of larva" /host="Protaetia brevitarsis seulensis" /culture_collection="KACC:19306" /type_material="type strain of Agromyces intestinalis" /db_xref="taxon:2592652" /country="South Korea: Jeonju" /collection_date="2017" /collected_by="Soo-Jin Kim, Soon-Wo Kwon" /identified_by="Soo-Jin Kim, Jun Heo, Soon-Wo Kwon" protein /locus_tag="FLP10_12515" /inference="COORDINATES: protein motif:HMM:PF01345.16" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /transl_table=11 BEGIN 1 MTVLALIGGF AVVGSVAGDP AAPPAAADPP DPVSDPPVLD PPVLFGPNDA TLRVFVGSDR 61 LANGTGESPL AGVTLALSNT QGGPLIAQPW ATCESNSAGV CTFTVPIGPG GVAEYTSLWV 121 RQTGSPAGYF ANPSFGTGTT GATQTDYTFP TPRLRAGATY DSGSAYTGRT PGGDQPDAAF 181 MTLTTEATSS IARSSGGVWQ VSRTNPAPLA KCGVNIAVVI DLSASVNPSL PELKSAATQT 241 VQALVGTPSS VALFTFGTNA PRQAGENMPL TPVSTQAGAN TVIAKINGYP ALTNQATNWD 301 RGLAQVGNGF DIVIVLTDGN PTRSEPGAVG PGSTTRFKEI ENGIFSANRI KAGTNSTGTV 361 GQRIIAVGVG DALASANARR NLASISGPTP YPTTGFDYIA TPDYGTAGQI MRALARAECP 421 GSVSIIKRVV RPGGTIADAP TAGGWTFDAS AVGGTLNQPS AITDGETGGV NFAIDYAEGV 481 DVARFTAAER IGDKPGYSLI PVGGRNATCT TLDGAPVTVT NAATGTGFSL DVNKLDQITC 541 TVYNQAPETS AALIVNKFWT INGGARIAET NQPSGLSAAL AVNGAPTAWG AVTSGLATTQ 601 NPIVAETRDT TLPRCEFTGA TLGRQGGPTA PFDGSEPVPL VVGSNVYEIV NNYECTSRLT 661 LHKGIRNGPG DPAGWTLHAV LGPEDPENPL PPNPIPGFSG STGVSGEVTP GVEYLLSESG 721 GDPRYIPNGY QSQDVTPGAI GSWDCEFVHA DGSTTPTTDG SDGDVSIGIG LDLDCSLDNL 781 TAALTLSKIV NNDNFGTVGP DAFTLRAVPV GPLPLPPGVV PIEVTGSEAG ALSWVRPEIE 841 YELQETDVAG YESTAIECTD NTGQFVPLVR FVPARLANIQ CRFTNDDLPA NIIITKEAVG 901 FPDATPRPYT FSGNWSGGGS FTIQAPGDGT LTDEVFENVA PGNYSVEEVT APDSVLTALS 961 CNIQGEDVLF DTTDRTATFP LVAGDTVQCF FTNAAVGTIQ IIKLTDPFNF GGVDFPFTFD 1021 DGEADPIAFV LRGAPSQDTS RSFSELLPGT YVIDENLPPG WSLDDGDIDC GAGENEIWTP 1081 NVAEGSVTIE LPPAGAVTCF YTDRALPPAG TIVKNVAGPD RSFNFTLQPL PSGNPTLVSV 1141 TTSGGSGSQP LPVALGQRYS LTETVPGGWT LTDFTCELTA ADGTVTTVNR LDFMVGPGGS 1201 LVCTANDAAN PATGTITKTA LGRDGTFTFL LDTVPPTQAF EPITIATTGQ VGAAALPPLT 1261 AGQTYSLVEQ PVEGWVSSPL RCTQRPPSGT AAAIDPAGFV AIPGGVIACA VDNTALPLVA 1321 KTVASAVPES GDTWVVTYSL TVTNPTVQNL TYDLVDVLDL PAGMEVLSAS ATNDAGVDTS 1381 AWDGTAGTEL ATGVPIVGAP TSSETVHTYT ITVRVRIDGS NFPLDERTCR PDGGGLFNGA 1441 SMTHNGVEYP VAACADIAVS QLTLRKIVEN GDTGKTGTPA DWELVATPQG IPAQGTVRGN 1501 GDDGVEQVAV LPGSYVLSEE SEQTGYLPGA WSCVGGQLEG DTLVLEDGAA ASCEIVNTAV 1561 ALAVDKTHDE LPDGAVESGS GEPVTYRVTV SNTGAAVPDV VVTDDLPTGL ALDPASIVAP 1621 DGWDVSGSTP TRFTATYTLG ALPPGEYEFS YVASVGEIAQ PDSSVPIDPL VNTACVGTPD 1681 PLACDDDEVP VASVAQTLSA FCRADAAYAA WTVTPSEVGE SPTVVLIWWP AAAYENRDPS 1741 IPASDPDAIL ADGAVRVDQV AVPAGWTSGT PITGESLWPG TTLDASGTGI GWPGWRKQAD 1801 GTWVKDASAP FFSVADGAVV EVRVNPSVSA TLPYPAMETV ECATRPRTQV PPPRPQVPVT 1861 GADIAGWLAL ATLLVAAGIG VRLVGGRRRH TA //