LOCUS       QDH17619.1               895 aa    PRT              BCT 02-JUL-2019
DEFINITION  Swingsia samuiensis DUF4175 family protein protein.
ACCESSION   CP038141-1662
PROTEIN_ID  QDH17619.1
SOURCE      Swingsia samuiensis
  ORGANISM  Swingsia samuiensis
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales;
            Acetobacteraceae; Swingsia.
REFERENCE   1  (bases 1 to 2163214)
  AUTHORS   Chua,K.-O., Chan,K.-G. and See-Too,W.-S.
  TITLE     The complete genome sequence of Swingsia samuiensis NBRC107927(T)
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 2163214)
  AUTHORS   Chua,K.-O., Chan,K.-G. and See-Too,W.-S.
  TITLE     Direct Submission
  JOURNAL   Submitted (20-MAR-2019) Institute of Biological Sciences,
            University of Malaya, University of Malaya, Kuala Lumpur, Kuala
            Lumpur 50603, Malaysia
COMMENT     Bacteria and source DNA available from NBRC.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 19-MAR-2019
            Assembly Method        :: HGAP v. 4
            Assembly Name          :: Swingsia_samuiensis
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 625.0x
            Sequencing Technology  :: PacBio Sequel
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/21/2019 13:37:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 2,097
            CDSs (total)                      :: 2,019
            Genes (coding)                    :: 1,987
            CDSs (with protein)               :: 1,987
            Genes (RNA)                       :: 78
            rRNAs                             :: 6, 6, 6 (5S, 16S, 23S)
            complete rRNAs                    :: 6, 6, 6 (5S, 16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 32
            CDSs (without protein)            :: 32
            Pseudo Genes (ambiguous residues) :: 0 of 32
            Pseudo Genes (frameshifted)       :: 16 of 32
            Pseudo Genes (incomplete)         :: 17 of 32
            Pseudo Genes (internal stop)      :: 8 of 32
            Pseudo Genes (multiple problems)  :: 8 of 32
            ##Genome-Annotation-Data-END##
FEATURES             Qualifiers
     source          /organism="Swingsia samuiensis"
                     /mol_type="genomic DNA"
                     /strain="AH83"
                     /isolation_source="Plant"
                     /host="Allamanda cathartica"
                     /type_material="type strain of Swingsia samuiensis"
                     /db_xref="taxon:1293412"
                     /country="Thailand: Samui Island"
                     /collection_date="14-Mar-2007"
     protein         /locus_tag="E3D00_08635"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015072112.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /transl_table=11
BEGIN
        1 MPDLTSAITR LTSARRRARH IMWWEKALPA LRWPFVIAML FILSTLARIP QSLPDWIHAT
       61 FEIVCFIAFV WLCIRGIRSL PTPSTAELDR RIEHASHFSA QPLLTLTDQP AYAGSAEQKY
      121 IWATHVQRII SSLGPLRTGF PHIQLTFREK ISSLIIVLAL LLGFTISGSH SISRLYAGFV
      181 PGVDDDSVPL PTLQAWIEQP DFAPGAPIFL SQTTANTTFT VPQGATLNII VTGAVSSPSI
      241 QGAQIFNRHQ LDEKSWTAKA TIQNNATLKI RSRGHLLGQW PITIIADLPP DVSWNGKPSP
      301 QKDDFRTVLP WKVHQSFGVA SLEAEIHLPH SHNNHIIHIP IPLNGTPKQA TGTAQPDLSS
      361 SPFAGMDVVG ILHATSISKK ENRSTPIHFT LGARKFSDPL AKAIIAVRQR LMLNQETPSQ
      421 AAYELQLLTQ TTDVRGIWAA LALNIATLQH QKTQDIPETI PDQLWALALY LDDLRHDGPE
      481 IADSAAAVRA AQQGVQQQLN HMHDLGEKGR SLDEQKELQR RTQILKDALN RRMQLLFQKA
      541 AQNGIIMPQS QASTADPWSE EMQRLQSDAS QGHGDEALKR LQQMEDMAEH MRQATPEDLK
      601 ALAQQMQARE EAHAQHSALR DLIHRETALL DHTQARLSEA QKAAQAQNPS ANNAQTDISQ
      661 MTTSDLLREL GQQPSKSIEQ NEAPSNLPTD PATVAQQSPA RQMDHASQRA LARVNKVLAQ
      721 RVKELTQKPV KAFDQAAKDM ASAQKSLADR NDSQAITAEQ KVLKDLSDAG KEMQKNQASG
      781 GSGSGKNGRL SFIPSGGMGN KTGPKHGAAG QQGDNGDDAE PDDDSDDDTQ QDKSKDPLGR
      841 KLGEGRSKND SNMHIPDSNA RDRARDIERE LRRRAADRTR PQTELDYLNR LLKSF
//