LOCUS       QDH17570.1               876 aa    PRT              BCT 02-JUL-2019
DEFINITION  Swingsia samuiensis DNA mismatch repair protein MutS protein.
ACCESSION   CP038141-1605
PROTEIN_ID  QDH17570.1
SOURCE      Swingsia samuiensis
  ORGANISM  Swingsia samuiensis
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales;
            Acetobacteraceae; Swingsia.
REFERENCE   1  (bases 1 to 2163214)
  AUTHORS   Chua,K.-O., Chan,K.-G. and See-Too,W.-S.
  TITLE     The complete genome sequence of Swingsia samuiensis NBRC107927(T)
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 2163214)
  AUTHORS   Chua,K.-O., Chan,K.-G. and See-Too,W.-S.
  TITLE     Direct Submission
  JOURNAL   Submitted (20-MAR-2019) Institute of Biological Sciences,
            University of Malaya, University of Malaya, Kuala Lumpur, Kuala
            Lumpur 50603, Malaysia
COMMENT     Bacteria and source DNA available from NBRC.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 19-MAR-2019
            Assembly Method        :: HGAP v. 4
            Assembly Name          :: Swingsia_samuiensis
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 625.0x
            Sequencing Technology  :: PacBio Sequel
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/21/2019 13:37:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 2,097
            CDSs (total)                      :: 2,019
            Genes (coding)                    :: 1,987
            CDSs (with protein)               :: 1,987
            Genes (RNA)                       :: 78
            rRNAs                             :: 6, 6, 6 (5S, 16S, 23S)
            complete rRNAs                    :: 6, 6, 6 (5S, 16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 32
            CDSs (without protein)            :: 32
            Pseudo Genes (ambiguous residues) :: 0 of 32
            Pseudo Genes (frameshifted)       :: 16 of 32
            Pseudo Genes (incomplete)         :: 17 of 32
            Pseudo Genes (internal stop)      :: 8 of 32
            Pseudo Genes (multiple problems)  :: 8 of 32
            ##Genome-Annotation-Data-END##
FEATURES             Qualifiers
     source          /organism="Swingsia samuiensis"
                     /mol_type="genomic DNA"
                     /strain="AH83"
                     /isolation_source="Plant"
                     /host="Allamanda cathartica"
                     /type_material="type strain of Swingsia samuiensis"
                     /db_xref="taxon:1293412"
                     /country="Thailand: Samui Island"
                     /collection_date="14-Mar-2007"
     protein         /gene="mutS"
                     /locus_tag="E3D00_08350"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007282399.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /transl_table=11
BEGIN
        1 MPLPSAENAS PAMAQWFELK HQEPDALLFF RMGDFYELFF ADAQAAAMAL DIALTSRGSH
       61 NGEPIPMCGV PYAAAPAYLS RLIRRGFRVA VAEQTQSPQK GQKGPLPRAI VRVVTPGTLT
      121 EDELLEAGQA NLLLAIALGT NKRSKTIGAA WIDISTGSFE TTSIEKTSLP ELIARLDPAE
      181 ILSDPPLIPP DFSLRLAPVA SIPSLDSART LIARAYDVAQ IDALGDFSEE QAIACAMALN
      241 YIQRSQAGAL PRLSRPIPQG ISGILGIDPA TRASLDLLKT RDGDTKYSLL NAVSRTVTAA
      301 GSRLLAQWIA APLTNAALIT DRQHAWLWLN KSPDLIHSLS QILKKTPDPA RALGRLSSNR
      361 GQPRDLATIR DTLIAADHFT DFLKPLCNDE APPLIQTLTT GLYQRAETLL TKLKTALAEN
      421 LPARIEDGGF IATGFHKELD HFRTLRDESR RIVAAMQSQL SEKYGITTLK IRHHSQLGYV
      481 IETPAAAGKK LKDRPELSFR QGTANLARFS TEELAELDRS ILEAADKASA LERQIFNELS
      541 QDILNTPELD EIAEMLALLD VLSSCAILSE NDEWTCPTVT EGTEFSLKAC RHPVVEAALL
      601 ESGSADARFI PNDCNLQADQ RVMLLTGPNM AGKSTFLRQN ALAVILAQAG LPVPAKSAQI
      661 GVVDRLFSRV GGADDLARGR STFMVEMTET AAILNQAGPK SLVVVDEIGR GTATLDGLSI
      721 AWATLEALHT QLGSRTIFAT HFHELGALTE FLPRLAPYTM AVKEWRGEVI FQHEVKPGSA
      781 RKSWGLHVAK LAGIPQSVIT RASRLLASLE KEQVQARSSL PLFEDTLPDQ RDEHIPSVPP
      841 NHSNILELIS SLNPDELSPK EALEKLYLIK RLEIGE
//