LOCUS       QDH17389.1               891 aa    PRT              BCT 02-JUL-2019
DEFINITION  Swingsia samuiensis hypothetical protein protein.
ACCESSION   CP038141-1397
PROTEIN_ID  QDH17389.1
SOURCE      Swingsia samuiensis
  ORGANISM  Swingsia samuiensis
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales;
            Acetobacteraceae; Swingsia.
REFERENCE   1  (bases 1 to 2163214)
  AUTHORS   Chua,K.-O., Chan,K.-G. and See-Too,W.-S.
  TITLE     The complete genome sequence of Swingsia samuiensis NBRC107927(T)
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 2163214)
  AUTHORS   Chua,K.-O., Chan,K.-G. and See-Too,W.-S.
  TITLE     Direct Submission
  JOURNAL   Submitted (20-MAR-2019) Institute of Biological Sciences,
            University of Malaya, University of Malaya, Kuala Lumpur, Kuala
            Lumpur 50603, Malaysia
COMMENT     Bacteria and source DNA available from NBRC.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 19-MAR-2019
            Assembly Method        :: HGAP v. 4
            Assembly Name          :: Swingsia_samuiensis
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 625.0x
            Sequencing Technology  :: PacBio Sequel
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/21/2019 13:37:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 2,097
            CDSs (total)                      :: 2,019
            Genes (coding)                    :: 1,987
            CDSs (with protein)               :: 1,987
            Genes (RNA)                       :: 78
            rRNAs                             :: 6, 6, 6 (5S, 16S, 23S)
            complete rRNAs                    :: 6, 6, 6 (5S, 16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 32
            CDSs (without protein)            :: 32
            Pseudo Genes (ambiguous residues) :: 0 of 32
            Pseudo Genes (frameshifted)       :: 16 of 32
            Pseudo Genes (incomplete)         :: 17 of 32
            Pseudo Genes (internal stop)      :: 8 of 32
            Pseudo Genes (multiple problems)  :: 8 of 32
            ##Genome-Annotation-Data-END##
FEATURES             Qualifiers
     source          /organism="Swingsia samuiensis"
                     /mol_type="genomic DNA"
                     /strain="AH83"
                     /isolation_source="Plant"
                     /host="Allamanda cathartica"
                     /type_material="type strain of Swingsia samuiensis"
                     /db_xref="taxon:1293412"
                     /country="Thailand: Samui Island"
                     /collection_date="14-Mar-2007"
     protein         /locus_tag="E3D00_07300"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /transl_table=11
BEGIN
        1 MMKKHHSLFA ALCLCFASST SYAGEVVPNH IAHPLHSDEA DSSGLMDRMG NSQPATKASP
       61 TLAPGGLSNK NVVSGFPSWS PNLGDIATYA DNSVQQADIG SKVAGLDKSG NVTAPVNTQH
      121 MDANDFLRVG SFPGTNTYFG QESPSPLGSF FTRRTINTND INLPATDGIP IERALMLGGQ
      181 RSYAKAFEWI FGQPDSGNLG AAVDFVAMNG MSAGQGTGVS AGGFDTMLGY MNYDAAARAT
      241 RTGSTPPKFV ASASVQDPDG VSHAVTFTAR GASFSPALPA YWGTMLHTGM NVATNELGVA
      301 TGTIKQSIWQ NNWDTDGYRR PFNTYFGTIT GWKRNPDGTI PSVSVDGWVI FQQGNYNLGN
      361 DRNKVPGKDT LDGSKPALDT VFTQISSPAI LFGVFTKAFP QYELCDLEPQ KPGGDFNNPN
      421 GSVYSLVHEC DHEVDLWNRD PTDYLNSIHG YTMVFDNSGG GKLTKDSYAF TVSGGGALPL
      481 GYHIRNLLEG SPGFQAMSNG STTQTNIYTP YAVGANIGDT SVLQSWGNEL AKGGINTSTL
      541 RLIQYRDAAP AANETNDAAQ SKVSLHLQWR WDTTVNPQAE QGAVGAQIVY NPPGYEYGLG
      601 LGAGGSFQNP AYGEYISQGG SVWLPNGATV MNGNGFGMIP FSGDTKGHPF IAASAPDTID
      661 AKTSAGGYAS INSYGVTVMN GQGVGLVPMS GDKGGHPFIT ASSSNAMDVK ATAGGYSQLN
      721 AYSLSANGGD VLVNTGQGVG FVPTTGDGAG HPYFHAADNY HLLLSDTAGG DGGLQVGAFT
      781 ANAAAVFKGT VYIPNQATID GNINTGGNIT LSTPGNYMKF SSPTPDSNNQ DQRIYADPDG
      841 SLYLTNIGKE ASHYMVTKVD GLKATMLKGS GNAFACLDAN GLLFRSDTPC K
//