LOCUS QDH17148.1 416 aa PRT BCT 02-JUL-2019 DEFINITION Swingsia samuiensis tyrosine--tRNA ligase protein. ACCESSION CP038141-1126 PROTEIN_ID QDH17148.1 SOURCE Swingsia samuiensis ORGANISM Swingsia samuiensis Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Swingsia. REFERENCE 1 (bases 1 to 2163214) AUTHORS Chua,K.-O., Chan,K.-G. and See-Too,W.-S. TITLE The complete genome sequence of Swingsia samuiensis NBRC107927(T) JOURNAL Unpublished REFERENCE 2 (bases 1 to 2163214) AUTHORS Chua,K.-O., Chan,K.-G. and See-Too,W.-S. TITLE Direct Submission JOURNAL Submitted (20-MAR-2019) Institute of Biological Sciences, University of Malaya, University of Malaya, Kuala Lumpur, Kuala Lumpur 50603, Malaysia COMMENT Bacteria and source DNA available from NBRC. Annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (released 2013). Information about the Pipeline can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Date :: 19-MAR-2019 Assembly Method :: HGAP v. 4 Assembly Name :: Swingsia_samuiensis Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 625.0x Sequencing Technology :: PacBio Sequel ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Date :: 03/21/2019 13:37:38 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 4.8 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA; repeat_region Genes (total) :: 2,097 CDSs (total) :: 2,019 Genes (coding) :: 1,987 CDSs (with protein) :: 1,987 Genes (RNA) :: 78 rRNAs :: 6, 6, 6 (5S, 16S, 23S) complete rRNAs :: 6, 6, 6 (5S, 16S, 23S) tRNAs :: 56 ncRNAs :: 4 Pseudo Genes (total) :: 32 CDSs (without protein) :: 32 Pseudo Genes (ambiguous residues) :: 0 of 32 Pseudo Genes (frameshifted) :: 16 of 32 Pseudo Genes (incomplete) :: 17 of 32 Pseudo Genes (internal stop) :: 8 of 32 Pseudo Genes (multiple problems) :: 8 of 32 ##Genome-Annotation-Data-END## FEATURES Qualifiers source /organism="Swingsia samuiensis" /mol_type="genomic DNA" /strain="AH83" /isolation_source="Plant" /host="Allamanda cathartica" /type_material="type strain of Swingsia samuiensis" /db_xref="taxon:1293412" /country="Thailand: Samui Island" /collection_date="14-Mar-2007" protein /locus_tag="E3D00_05895" /EC_number="6.1.1.1" /inference="COORDINATES: similar to AA sequence:RefSeq:WP_015073229.1" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /transl_table=11 BEGIN 1 MPKSPFLIEA QARGLIFQCT DLDALDEVMS AGPITAYVGF DPTADSLHVG NALSIMALRL 61 LQKHGHRPIA LMGGGTAKIG DPSFRDEARK LMTNETIAHN IAGIEKSLRQ FIHFSDEQTP 121 DGAILVNNAD WLDKLSYINL LQDAGIHFSV NRMLSFESVK QRLDREQGLT FLEFNYSILQ 181 SYDFRELHRQ HGAVLQMGGS DQWGNIVSGI DLTRRTDGKQ VFGLTTPLVT TSSGAKMGKS 241 ANGATWVRAE KLPVFEYWQF WRNTEDADVG RFLKLFTDLP VEECERLGAL QGAEINDAKK 301 ILATEATAIC HGRSAAEEAA ETARRVFEQG SSQAALPTID IPSALLTEGI PAFRIFQEAK 361 LAASGGEARR LIRGGGGRIN DIVISDENQV FSSKDIKDGS LKVSSGKKKH VLLVPV //