LOCUS       QDH16682.1               857 aa    PRT              BCT 02-JUL-2019
DEFINITION  Swingsia samuiensis mechanosensitive ion channel protein.
ACCESSION   CP038141-599
PROTEIN_ID  QDH16682.1
SOURCE      Swingsia samuiensis
  ORGANISM  Swingsia samuiensis
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales;
            Acetobacteraceae; Swingsia.
REFERENCE   1  (bases 1 to 2163214)
  AUTHORS   Chua,K.-O., Chan,K.-G. and See-Too,W.-S.
  TITLE     The complete genome sequence of Swingsia samuiensis NBRC107927(T)
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 2163214)
  AUTHORS   Chua,K.-O., Chan,K.-G. and See-Too,W.-S.
  TITLE     Direct Submission
  JOURNAL   Submitted (20-MAR-2019) Institute of Biological Sciences,
            University of Malaya, University of Malaya, Kuala Lumpur, Kuala
            Lumpur 50603, Malaysia
COMMENT     Bacteria and source DNA available from NBRC.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 19-MAR-2019
            Assembly Method        :: HGAP v. 4
            Assembly Name          :: Swingsia_samuiensis
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 625.0x
            Sequencing Technology  :: PacBio Sequel
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/21/2019 13:37:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 2,097
            CDSs (total)                      :: 2,019
            Genes (coding)                    :: 1,987
            CDSs (with protein)               :: 1,987
            Genes (RNA)                       :: 78
            rRNAs                             :: 6, 6, 6 (5S, 16S, 23S)
            complete rRNAs                    :: 6, 6, 6 (5S, 16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 32
            CDSs (without protein)            :: 32
            Pseudo Genes (ambiguous residues) :: 0 of 32
            Pseudo Genes (frameshifted)       :: 16 of 32
            Pseudo Genes (incomplete)         :: 17 of 32
            Pseudo Genes (internal stop)      :: 8 of 32
            Pseudo Genes (multiple problems)  :: 8 of 32
            ##Genome-Annotation-Data-END##
FEATURES             Qualifiers
     source          /organism="Swingsia samuiensis"
                     /mol_type="genomic DNA"
                     /strain="AH83"
                     /isolation_source="Plant"
                     /host="Allamanda cathartica"
                     /type_material="type strain of Swingsia samuiensis"
                     /db_xref="taxon:1293412"
                     /country="Thailand: Samui Island"
                     /collection_date="14-Mar-2007"
     protein         /locus_tag="E3D00_03150"
                     /inference="COORDINATES: protein motif:HMM:PF00924.16"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /transl_table=11
BEGIN
        1 MQRNWGSRLI REKQEVFKSD QSQRRSIFPA MLAFLCLCLL AVPQKGFADV SADNSHKSVQ
       61 QAPRLTSDQT QQLLGVLDND KKRQEFITTL KNLSAAQQQG LAPGKKATPG AAPAKQNLGE
      121 ALLSSLVVGG KTVQHEGQIL IKTIGNFRSL GPWLLYVRDT PDAQNEIIKI LIRIGILVVG
      181 GGVASFLLKL VLRRPKQIIE NKARQNNLRK ELSEHRKMQD VKKDAQDDLE QEKQDVVQEK
      241 QNDELLKKEQ PSEKVETEAE RLERVEQEQA DRLRHQGSLV RLMLALSRLP FSLGCFILDL
      301 IPIALFPIVA LLIQTFDVNG DVHTIEALDA IAWIGGVAAF GFVALMRAIF SPDQVWLRLA
      361 MVGDTGARFW FVWLRRLAIT FGTCYSILSV FSTFGMPDNV VIAFGKIMAL VLHVMIAVMI
      421 LQARRPISKA CNRIADHSRF SGLIRFLGHF WWVAALFFDL GLWLVWAAEI RGGYEQIAAL
      481 FLWTCVAVII IRLLSIMAYG CLERLFKAVP IWLDLNDESK ERLSRYRPAV RRAVSFVMGV
      541 VSVVVFSIAW GVPVKELLGH GSIGIHLLSS LSTIVVAVIL GMIVWEAANI FIERHVEKIK
      601 KEPDGFARVA RLRTLHPMFR IILMTILIVI IGLTVLSELG INTAPLLASA SIFGVALGFG
      661 SQKLVQDFIS GIFLLMENAL TVGDAVTLNG TYGVIDKLSL RTVHVRANDG SINIFPFSSL
      721 SQIVNYNRDF ARALIVAEVG YSVDTDAVVQ AFRDITAGLR EDPDFKHLII DDFQLGGVDS
      781 LNDSSVTVKG TLPTTPDGRW PVQRQFYRRM KKYFEEHGID MPFPTRTLEI PALESLVKKE
      841 NKQGEAQEEI KIEKKDD
//