LOCUS       PKU63343.1               442 aa    PRT              CON 21-DEC-2017
DEFINITION  Dendrobium catenatum tRNA-dihydrouridine synthase A protein.
ACCESSION   KZ503501-39
PROTEIN_ID  PKU63343.1
SOURCE      Dendrobium catenatum
  ORGANISM  Dendrobium catenatum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; Liliopsida; Asparagales; Orchidaceae;
            Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium.
REFERENCE   1  (bases 1 to 1498525)
  AUTHORS   Zhang,G.Q., Xu,Q., Bian,C., Tsai,W.C., Yeh,C.M., Liu,K.W.,
            Yoshida,K., Zhang,L.S., Chang,S.B., Chen,F., Shi,Y., Su,Y.Y.,
            Zhang,Y.Q., Chen,L.J., Yin,Y., Lin,M., Huang,H., Deng,H.,
            Wang,Z.W., Zhu,S.L., Zhao,X., Deng,C., Niu,S.C., Huang,J., Wang,M.,
            Liu,G.H., Yang,H.J., Xiao,X.J., Hsiao,Y.Y., Wu,W.L., Chen,Y.Y.,
            Mitsuda,N., Ohme-Takagi,M., Luo,Y.B., Van de Peer,Y. and Liu,Z.J.
  TITLE     The Dendrobium catenatum Lindl. genome sequence provides insights
            into polysaccharide synthase, floral development and adaptive
            evolution
  JOURNAL   Sci Rep 6, 19029 (2016)
   PUBMED   26754549
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1498525)
  AUTHORS   Zhang,G.Q., Liu,K.W., Li,Z., Lohaus,R., Hsiao,Y.Y., Niu,S.C.,
            Wang,J.Y., Lin,Y.C., Xu,Q., Chen,L.J., Yoshida,K., Fujiwara,S.,
            Wang,Z.W., Zhang,Y.Q., Mitsuda,N., Wang,M., Liu,G.H., Pecoraro,L.,
            Huang,H.X., Xiao,X.J., Lin,M., Wu,X.Y., Wu,W.L., Chen,Y.Y.,
            Chang,S.B., Sakamoto,S., Ohme-Takagi,M., Yagi,M., Zeng,S.J.,
            Shen,C.Y., Yeh,C.M., Luo,Y.B., Tsai,W.C., Van de Peer,Y. and
            Liu,Z.J.
  TITLE     The Apostasia genome and the evolution of orchids
  JOURNAL   Nature 549 (7672), 379-383 (2017)
   PUBMED   28902843
REFERENCE   3  (bases 1 to 1498525)
  AUTHORS   Zhang,G.-Q., Xu,Q., Liu,K.-W., Chen,F., Hsiao,Y.-Y., Yoshida,K.,
            Su,Y.-Y., Zhang,Y.-Q., Chen,L.-J., Deng,H., Zhu,S.-L., Zhao,X.,
            Deng,C., Niu,S.-C., Huang,J., Wang,M., Liu,G.-H., Yang,H.-J.,
            Mitsuda,N., Yeh,C.-M., Tsai,W.-C., Zhang,L.-S., Wang,Z.-W.,
            Luo,Y.-B., Bian,C. and Liu,Z.-J.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2014) Shenzhen Key Laboratory for Orchid
            Conservation and Utilization, The National Orchid Conservation
            Center of China, and the Orchid Conservation and Research Center of
            Shenzhen, No. 889 Wangtong Road, Shenzhen, Guangdong 518114, China
REFERENCE   4  (bases 1 to 1498525)
  AUTHORS   Zhang,G.-Q., Xu,Q., Bian,C., Tsai,W.-C., Yeh,C.-M., Liu,K.-W.,
            Yoshida,K., Zhang,L.-S., Chang,S.-B., Chen,F., Shi,Y., Su,Y.-Y.,
            Zhang,Y.-Q., Chen,L.-J., Yin,Y., Lin,M., Huang,H., Deng,H.,
            Wang,Z.-W., Zhu,S.-L., Zhao,X., Deng,C., Niu,S.-C., Huang,J.,
            Wang,M., Liu,G.-H., Yang,H.-J., Xiao,X.-J., Hsiao,Y.-Y., Wu,W.-L.,
            Chen,Y.-Y., Mitsuda,N., Ohme-Takagi,M., Luo,Y.-B., Van De Peer,Y.
            and Liu,Z.-J.
  TITLE     Direct Submission
  JOURNAL   Submitted (28-NOV-2017) Shenzhen Key Laboratory for Orchid
            Conservation and Utilization, The National Orchid Conservation
            Center of China, Wangtong Road, Shenzhen 518114, China
COMMENT     ##Genome-Assembly-Data-START##
            Assembly Date          :: 10-MAY-2014
            Assembly Method        :: platanus v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 202.0x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
FEATURES             Qualifiers
     source          /organism="Dendrobium catenatum"
                     /mol_type="genomic DNA"
                     /submitter_seqid="fragScaff_scaffold_1680"
                     /specimen_voucher="NOCC:Z.J. Liu 4979"
                     /db_xref="taxon:906689"
                     /chromosome="Unknown"
                     /sex="hermaphrodite"
                     /tissue_type="The whole plant"
                     /dev_stage="Growing period"
                     /country="China: Yunan, Guangnan County"
                     /lat_lon="23.57 N 104.59 E"
                     /collection_date="2012-09-17"
                     /collected_by="Zhong-Jian Liu"
     protein         /locus_tag="MA16_Dca013387"
                     /note="GO_function: GO:0017150 - tRNA dihydrouridine
                     synthase activity [Evidence IEA]; GO_function: GO:0050660
                     - flavin adenine dinucleotide binding [Evidence IEA];
                     GO_process: GO:0008033 - tRNA processing [Evidence IEA];
                     GO_process: GO:0055114 - oxidation-reduction process
                     [Evidence IEA]"
                     /db_xref="InterPro:IPR001269"
     intron_pos      66:2 (1/11)
     intron_pos      109:0 (2/11)
     intron_pos      151:2 (3/11)
     intron_pos      175:0 (4/11)
     intron_pos      209:1 (5/11)
     intron_pos      248:2 (6/11)
     intron_pos      276:0 (7/11)
     intron_pos      296:2 (8/11)
     intron_pos      321:0 (9/11)
     intron_pos      349:0 (10/11)
     intron_pos      376:0 (11/11)
BEGIN
        1 MKTAMHTLLC TLIPIYHGNA AAYRKSISML HDASAQFKRV QSLKRKLEIN TETCLDGGKS
       61 HPPLFSVAPM MDWTDNHYRT LARLISRHAW LYTEMVVAET IVHQKDNLDR FLAFSPDQHP
      121 IVLQIGGSNL ENLAKAAELA NLYSYDEINF NCGCPSGKVA GHGCFGARLM FNPKLVGHAM
      181 SAIAANSDVP VSVKCRIGVD DRDSYNELCD FIYTVSSQSP TNHFVIHARK ALLSGLSPAE
      241 NRKVPPLKYE YYFALLRDFP ELQFTLNGGI TCINQVDAAI RQGASGVMVG RAAYNNPWFT
      301 LGHVDVAIYG VPFHRCSRRQ IIEQYQEYAD SVIGKFGSNK PNVRQLVKPL LNLFHSEPGN
      361 SRWKRAADAA LRHCKTVRSF LEETLPNLPD EVLDSTLVNS PCDHERFADV DAILPPPYRS
      421 SGEQLAYEEG EGTRQGSLLS CL
//