LOCUS PKU60864.1 604 aa PRT CON 21-DEC-2017 DEFINITION Dendrobium catenatum putative phenylalanine--tRNA ligase beta subunit protein. ACCESSION KZ503875-25 PROTEIN_ID PKU60864.1 SOURCE Dendrobium catenatum ORGANISM Dendrobium catenatum Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium. REFERENCE 1 (bases 1 to 1278363) AUTHORS Zhang,G.Q., Xu,Q., Bian,C., Tsai,W.C., Yeh,C.M., Liu,K.W., Yoshida,K., Zhang,L.S., Chang,S.B., Chen,F., Shi,Y., Su,Y.Y., Zhang,Y.Q., Chen,L.J., Yin,Y., Lin,M., Huang,H., Deng,H., Wang,Z.W., Zhu,S.L., Zhao,X., Deng,C., Niu,S.C., Huang,J., Wang,M., Liu,G.H., Yang,H.J., Xiao,X.J., Hsiao,Y.Y., Wu,W.L., Chen,Y.Y., Mitsuda,N., Ohme-Takagi,M., Luo,Y.B., Van de Peer,Y. and Liu,Z.J. TITLE The Dendrobium catenatum Lindl. genome sequence provides insights into polysaccharide synthase, floral development and adaptive evolution JOURNAL Sci Rep 6, 19029 (2016) PUBMED 26754549 REMARK Publication Status: Online-Only REFERENCE 2 (bases 1 to 1278363) AUTHORS Zhang,G.Q., Liu,K.W., Li,Z., Lohaus,R., Hsiao,Y.Y., Niu,S.C., Wang,J.Y., Lin,Y.C., Xu,Q., Chen,L.J., Yoshida,K., Fujiwara,S., Wang,Z.W., Zhang,Y.Q., Mitsuda,N., Wang,M., Liu,G.H., Pecoraro,L., Huang,H.X., Xiao,X.J., Lin,M., Wu,X.Y., Wu,W.L., Chen,Y.Y., Chang,S.B., Sakamoto,S., Ohme-Takagi,M., Yagi,M., Zeng,S.J., Shen,C.Y., Yeh,C.M., Luo,Y.B., Tsai,W.C., Van de Peer,Y. and Liu,Z.J. TITLE The Apostasia genome and the evolution of orchids JOURNAL Nature 549 (7672), 379-383 (2017) PUBMED 28902843 REFERENCE 3 (bases 1 to 1278363) AUTHORS Zhang,G.-Q., Xu,Q., Liu,K.-W., Chen,F., Hsiao,Y.-Y., Yoshida,K., Su,Y.-Y., Zhang,Y.-Q., Chen,L.-J., Deng,H., Zhu,S.-L., Zhao,X., Deng,C., Niu,S.-C., Huang,J., Wang,M., Liu,G.-H., Yang,H.-J., Mitsuda,N., Yeh,C.-M., Tsai,W.-C., Zhang,L.-S., Wang,Z.-W., Luo,Y.-B., Bian,C. and Liu,Z.-J. TITLE Direct Submission JOURNAL Submitted (25-OCT-2014) Shenzhen Key Laboratory for Orchid Conservation and Utilization, The National Orchid Conservation Center of China, and The Orchid Conservation and Research Center of Shenzhen, No. 889 Wangtong Road, Shenzhen, Guangdong 518114, China REFERENCE 4 (bases 1 to 1278363) AUTHORS Zhang,G.-Q., Xu,Q., Bian,C., Tsai,W.-C., Yeh,C.-M., Liu,K.-W., Yoshida,K., Zhang,L.-S., Chang,S.-B., Chen,F., Shi,Y., Su,Y.-Y., Zhang,Y.-Q., Chen,L.-J., Yin,Y., Lin,M., Huang,H., Deng,H., Wang,Z.-W., Zhu,S.-L., Zhao,X., Deng,C., Niu,S.-C., Huang,J., Wang,M., Liu,G.-H., Yang,H.-J., Xiao,X.-J., Hsiao,Y.-Y., Wu,W.-L., Chen,Y.-Y., Mitsuda,N., Ohme-Takagi,M., Luo,Y.-B., Van De Peer,Y. and Liu,Z.-J. TITLE Direct Submission JOURNAL Submitted (28-NOV-2017) Shenzhen Key Laboratory for Orchid Conservation and Utilization, The National Orchid Conservation Center of China, Wangtong Road, ShenZhen 518114, China COMMENT ##Genome-Assembly-Data-START## Assembly Date :: 10-MAY-2014 Assembly Method :: platanus v. 1.2.1 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 202.0x Sequencing Technology :: Illumina HiSeq ##Genome-Assembly-Data-END## FEATURES Qualifiers source /organism="Dendrobium catenatum" /mol_type="genomic DNA" /submitter_seqid="original_scaffold_144855" /specimen_voucher="NOCC:Z.J. Liu 4979" /db_xref="taxon:906689" /chromosome="Unknown" /sex="hermaphrodite" /tissue_type="The whole plant" /dev_stage="Growing period" /country="China: Yunan, Guangnan County" /lat_lon="23.57 N 104.59 E" /collection_date="2012-09-17" /collected_by="Zhong-Jian Liu" protein /locus_tag="MA16_Dca015408" /note="GO_function: GO:0000287 - magnesium ion binding [Evidence IEA]; GO_function: GO:0003723 - RNA binding [Evidence IEA]; GO_function: GO:0004826 - phenylalanine-tRNA ligase activity [Evidence IEA]; GO_function: GO:0005524 - ATP binding [Evidence IEA]; GO_process: GO:0006432 - phenylalanyl-tRNA aminoacylation [Evidence IEA]" /db_xref="InterPro:IPR005146" /db_xref="InterPro:IPR005147" intron_pos 20:1 (1/18) intron_pos 39:0 (2/18) intron_pos 73:2 (3/18) intron_pos 117:0 (4/18) intron_pos 155:2 (5/18) intron_pos 178:0 (6/18) intron_pos 192:0 (7/18) intron_pos 206:0 (8/18) intron_pos 231:2 (9/18) intron_pos 274:0 (10/18) intron_pos 343:0 (11/18) intron_pos 385:0 (12/18) intron_pos 420:0 (13/18) intron_pos 465:0 (14/18) intron_pos 490:0 (15/18) intron_pos 526:0 (16/18) intron_pos 555:0 (17/18) intron_pos 583:0 (18/18) BEGIN 1 MPTVSVGRDC LFQALGRSYT QEEFEELCFE FGIELDDVTT EKEIIRKEKH LETEVGGEDE 61 EEVIYKIEVA ANRYDLLCLE GIARALRIFI GKEEIPIYKF REIPRESMLQ INVSKATSQI 121 RPYVVGAVLR GVSFNRANYN SFIDLQDKLH QNICRKRTRV AIGTHDLDTI DTPFSYEALI 181 PQDITFIPLK QVKSFRADEL LEFYKSDLKL KKFLHIIENS PVYPVIYDRN RTVLSLPPII 241 NSAHSALSLR TKNVFIECTA TDLTKAKIVL NTMVTMFSEY CDSKFEVEPV EVVYPDDRQF 301 EDCTSEGIFK GKNIYPDLAV TVMDIPLSVI TCPIGVTLGV AEVIPLLNKM QLHAKEKLVT 361 GNNVITVHVP PTRSDILHPC DVMEDVAIAY GYDKIPRTKP KCIGGQQPLN VFSDKIRGEV 421 SSAGYMEVLT WLLCSHEENF AMVKRKDDGA KAVTIENPRS SEFEVVRTSL LPGLLKTLKH 481 NIDHRRPIKI FEVGDVVCLD GTRDVGASNN RRLAALYCNV TSGFEEILGL VMRIMQVVRK 541 PHEPANDNFI RPSNEPEFFP NRQCYIIFKD KQIGAFGVVH PEVLEKFGIP DPCSFVEIDI 601 QALL //