LOCUS       CZR14633.1               873 aa    PRT              CON 06-FEB-2024
DEFINITION  Caenorhabditis elegans Liprin-beta homolog protein.
ACCESSION   BX284606-3324
PROTEIN_ID  CZR14633.1
SOURCE      Caenorhabditis elegans
  ORGANISM  Caenorhabditis elegans
            Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida;
            Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae;
            Caenorhabditis.
REFERENCE   1  (bases 1 to 17718942)
  AUTHORS   WormBase.
  CONSRTM   WormBase Consortium
  JOURNAL   Submitted (04-FEB-2024) to the INSDC. WormBase Group, European
            Bioinformatics Institute, Cambridge, CB10 1SA, UK. Email:
            help@wormbase.org
REFERENCE   2  (bases 1 to 17718942)
  AUTHORS   Sulson J.E., Waterston R.
  JOURNAL   Submitted (03-MAR-2003) to the INSDC. Nematode Sequencing Project:
            Sanger Institute, Hinxton, Cambridge CB10 1SA, UK and The Genome
            Institute at Washington University, St. Louis, MO 63110, USA.
REFERENCE   3  (bases 1 to 17718942)
  AUTHORS   Sulson J.E., Waterston R.
  CONSRTM   Caenorhabditis elegans Sequencing Consortium
  TITLE     Genome sequence of the nematode C. elegans: a platform for
            investigating biology
  JOURNAL   Science 282(5396), 2012-2018(1998).
COMMENT     Annotated features correspond to WormBase release WS292.
            Protein-coding gene structures below are the result of integration
            and manual review of the following types of data: ab initio
            predictions by Genefinder (P. Green and L. Hillier, pers. comm.);
            alignments to published proteins and cDNAs; genome sequence
            conservation with other nematodes (e.g. to C. briggsae using WABA:
            Genome Res. 2000. 10:1115-1125); sequence features (such as
            trans-splice and polyA sites).
            Sources of data: large-scale EST projects of Yuji Kohara
            (http://www.ddbj.nig.ac.jp/c-elegans/html/CE_INDEX.html); ORFeome
            cloning project (http://worfdb.dfci.harvard.edu); RST large-scale
            sequencing project (Genome Res. 2009. 19:2334-2342); IST library
            (Science. 2004. 303:540-3); RT-PCR EST set (Ewing B. Green P. 2010
            Unpublished); UTRome EST data submission (UTRome v1 Mangone M.
            Piano F. 2009); TEC-RED data (PNAS 2004. 101:1650-1655); RNA Deep
            sequencing data (454 read clusters - Makedonka Mitreva,
            unpublished; Illumina sequence data, Genome Res. 2009. 19:657-66);
            Numerous data sets from the modENCODE project (Science. 2010.
            330:1775-87); Individual C. elegans Nucleotide Database
            submissions; Personal communications with C. elegans researchers;
            Non-Coding gene structures below are derived using the following
            methods and data: ab initio prediction of tRNAs by tRNAscan-SE
            (Nucl. Acids. Res., 25, 955-964); integration and appraisal of
            miRNAs from miRBase (http://www.mirbase.org); integration and
            appraisal of RFAM predictions (rfam.sanger.ac.uk); 21U-RNAs (Cell.
            2006. 127:1193-1207); modENCODE data (Science. 2010. 330:1775-87);
            manual curation of novel published ncRNAs from the literature.
FEATURES             Qualifiers
     source          /organism="Caenorhabditis elegans"
                     /chromosome="X"
                     /strain="Bristol N2"
                     /mol_type="genomic DNA"
                     /db_xref="taxon:6239"
     protein         /transl_table=1
                     /gene="hlb-1"
                     /locus_tag="CELE_T21H8.1"
                     /standard_name="T21H8.1c"
                     /note="Partially confirmed by transcript evidence"
                     /db_xref="GOA:Q94071"
                     /db_xref="InterPro:IPR001660"
                     /db_xref="InterPro:IPR013761"
                     /db_xref="InterPro:IPR029515"
                     /db_xref="InterPro:IPR030444"
                     /db_xref="InterPro:IPR037617"
                     /db_xref="InterPro:IPR037618"
                     /db_xref="UniProtKB/Swiss-Prot:Q94071"
                     /db_xref="WormBase:WBGene00011904"
     intron_pos      63:2 (1/12)
     intron_pos      159:0 (2/12)
     intron_pos      193:0 (3/12)
     intron_pos      231:0 (4/12)
     intron_pos      313:0 (5/12)
     intron_pos      417:2 (6/12)
     intron_pos      460:0 (7/12)
     intron_pos      480:1 (8/12)
     intron_pos      716:0 (9/12)
     intron_pos      762:0 (10/12)
     intron_pos      825:0 (11/12)
     intron_pos      862:0 (12/12)
BEGIN
        1 MYSRHSISDA YGAVCILPED TLTVSSSQNS HIDAFAALVD RERDSSRSSG SGNIFKDNGS
       61 IKRRQALPYV THYSDSGFGS APSAGSSCSY LPPPPPYRMR GSGGLSSKPQ HKIHRSLSDS
      121 KYTASLMTTG VPTLPLLSMT PFNQLQSRDA RGASWISLSP SPSMSTVSCP EYPELQDKLH
      181 RLAMARDSLQ LQVSVLSEQV GAQKEKIKDL ETVIALKRNN LTSTEELLQD NEMDHVNQSM
      241 HGMVVQQQLA HHTNGHSSGG YMSPLREHRS EKNDDEMSQL RTAVQRLMAD NEHKSLQINT
      301 LRNALDEQMR SRSQQEDFYA SQRNYTDNFD VNAQIRRILM DEPSDSMSHS TSFPVSLSST
      361 TSNGKGPRST VQSSSSYNSS LSAVSPQHNW SSAGAGTPRQ LHPIGGNQRV NNITSAQYCS
      421 PSPPAARQLA AELDELRRNG NEGANHNYSS ASLPRGVGKA SSTLTLPSKK LSVASGTSVV
      481 ESDDEIARGR NLNNATSQSN LKNFSRERTR SSLRNIFSKL TRSTSQDQSN SFRRGSAARS
      541 TSTARLGSTN HLGTVSKRPP LSQFVDWRSE QLADWIAEIG YPQYMNEVSR HVRSGRHFLN
      601 MSMNEYEGVL NIKNPVHRKR VAILLRRIEE DIMEPANKWD VHQTLRWLDD IGLPQYKDVF
      661 AENVVDGPLL LSLTANDAVE MKVVNAHHYA TLARSIQFLK KADFRFNAME KLIDQNIVEK
      721 YPCPDVVVRW THSATCEWLR KIDLAEFTQN LLFAGVPGAL MIYEPSFTAE SLAEILQMPP
      781 HKTLLRRHLT SHFNQLLGPK IIADKRDFLA AGNYPQISPT GRVKVVKKGF SLTRKKAKNE
      841 ICLEPEELLC PQVLVHKYPT GAGDNSSFES SNV
//