LOCUS CCP46063.1 583 aa PRT BCT 27-FEB-2015 DEFINITION Mycobacterium tuberculosis H37Rv Probable conserved lipoprotein LpqB protein. ACCESSION AL123456-3341 PROTEIN_ID CCP46063.1 SOURCE Mycobacterium tuberculosis H37Rv ORGANISM Mycobacterium tuberculosis H37Rv Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium tuberculosis complex. REFERENCE 1 AUTHORS Cole S.T., Brosch R., Parkhill J., Garnier T., Churcher C., Harris D., Gordon S.V., Eiglmeier K., Gas S., Barry C.E.III., Tekaia F., Badcock K., Basham D., Brown D., Chillingworth T., Connor R., Davies R., Devlin K., Feltwell T., Gentles S., Hamlin N., Holroyd S., Hornsby T., Jagels K., Krogh A., McLean J., Moule S., Murphy L., Oliver K., Osborne J., Quail M.A., Rajandream M.A., Rogers J., Rutter S., Seeger K., Skelton J., Squares R., Squares S., Sulston J.E., Taylor K., Whitehead S., Barrell B.G. TITLE Deciphering the biology of Mycobacterium tuberculosis from the complete genome sequence JOURNAL Nature 393(6685), 537-544(1998). PUBMED 9634230 REMARK Erratum:[Nature 1998 Nov 12;396(6707):190] REFERENCE 2 AUTHORS Camus J.C., Pryor M.J., Medigue C., Cole S.T. TITLE Re-annotation of the genome sequence of Mycobacterium tuberculosis H37Rv JOURNAL Microbiology (Reading, Engl.) 148(Pt 10), 2967-2973(2002). PUBMED 12368430 REFERENCE 3 AUTHORS Lew J.M., Kapopoulou A., Jones L.M., Cole S.T. TITLE TubercuList--10 years after JOURNAL Tuberculosis (Edinb) 91(1), 1-7(2011). PUBMED 20980199 REFERENCE 4 (bases 1 to 4411529) AUTHORS Parkhill J. JOURNAL Submitted (11-JUN-1998) to the INSDC. Submitted on behalf of the Mycobacterium tuberculosis sequencing and mapping teams, Sanger Centre, Wellcome Trust Genome Campus, Hinxton, Cambridge CB10 1SA Unite de Genetique Moleculaire Bacterienne, Institut Pasteur, 28 rue du Docteur Roux, 75724 Paris Cedex 15, France E-mail: parkhill@sanger.ac.uk REFERENCE 5 (bases 1 to 4411532) AUTHORS Lew J.M. JOURNAL Submitted (18-DEC-2012) to the INSDC. Lew J., Ecole Polytechnique Federale de Lausanne, CH-1015, Lausanne, Switzerland, and the Swiss Institute of Bioinformatics, CMU - Rue Michel-Servet 1, 1211 Geneva 4, SWITZERLAND COMMENT On or before Feb 1, 2013 this sequence version replaced gi:41352722, gi:38490165, gi:38490207, gi:41353619, gi:38490250, gi:38684030, gi:38490288, gi:41353667, gi:41353422, gi:41352756, gi:38490319, gi:41352785, gi:38490370, gi:41353971. Note: This annotation is from the TubercuList website, Release 26, Dec 2012 (URL: http://tuberculist.epfl.ch) (email: tuberculist@epfl.ch). FEATURES Qualifiers source /organism="Mycobacterium tuberculosis H37Rv" /strain="H37Rv" /mol_type="genomic DNA" /db_xref="taxon:83332" protein /transl_table=11 /gene="lpqB" /locus_tag="Rv3244c" /note="Rv3244c, (MTCY20B11.19c), len: 583 aa. Probable lpqB, conserved lipoprotein; contains appropriately placed lipoprotein signature (PS00013). Equivalent to Q9CCJ0|LPQB|ML0775 putative lipoprotein from Mycobacterium leprae (589 aa), FASTA scores: opt: 3375, E(): 1.4e-186,(87.9% identity in 579 aa overlap). Also similar to various proteins (in particular transferases) e.g. Q9KYX0|SCE33.13c putative lipoprotein from Streptomyces coelicolor (615 aa),FASTA scores: opt: 228, E(): 1.3e-05, (25.5% identity in 624 aa overlap); O87992|BBLPS1.19c putative glutamine amidotransferase from Bordetella bronchiseptica (Alcaligenes bronchisepticus) (628 aa), FASTA scores: opt: 162, E(): 0.079, (28.05% identity in 171 aa overlap); Q9L2F4|SC7A8.01 putative sugar kinase (fragment) from Streptomyces coelicolor (434 aa), FASTA scores: opt: 143,E(): 0.72, (27.65% identity in 293 aa overlap); etc." /db_xref="EnsemblGenomes-Gn:Rv3244c" /db_xref="EnsemblGenomes-Tr:CCP46063" /db_xref="GOA:P9WK37" /db_xref="InterPro:IPR018910" /db_xref="InterPro:IPR019606" /db_xref="InterPro:IPR023959" /db_xref="UniProtKB/Swiss-Prot:P9WK37" /inference="protein motif:PROSITE:PS00013" /experiment="EXISTENCE: identified in proteomics study" BEGIN 1 MRLTILLFLG AVLAGCASVP STSAPQAIGT VERPVPSNLP KPSPGMDPDV LLREFLKATA 61 DPANRHLAAR QFLTESASNA WDDAGSALLI DHVVFVETRS AEKVSVTMRA DILGSLSDVG 121 VFETAEGQLP DPGPIELVKT SDGWRIDRLP NGVFLDWQQF QETYKRNTLY FADPTGKTVV 181 PDPRYVAVSD RDQLATELVS KLLAGPRPEM ARTVRNLLAP PLRLRGPVTR ADGGKSGIGR 241 GYGGARVDME KLSTTDPHSR QLLAAQIIWT LARADIRGPY VINADGAPLE DRFAEGWTTS 301 DVAATDPGVA DGAAAGLHAL VNGSLVAMDA QRVTPVPGAF GRMPEQTAAA VSRSGRQVAS 361 VVTLGRGAPD EAASLWVGDL GGEAVQSADG HSLSRPSWSL DDAVWVVVDT NVVLRAIQDP 421 ASGQPARIPV DSTAVASRFP GAINDLQLSR DGTRAAMVIG GQVILAGVEQ TQAGQFALTY 481 PRRLGFGLGS SVVSLSWRTG DDIVVTRTDA AHPVSYVNLD GVNSDAPSRG LQTPLTAIAA 541 NPSTVYVAGP QGVLMYSASV ESRPGWADVP GLMVPGAAPV LPG //