LOCUS       CCD83475.1               807 aa    PRT              CON 06-FEB-2024
DEFINITION  Caenorhabditis elegans PH domain-containing protein protein.
ACCESSION   BX284606-1272
PROTEIN_ID  CCD83475.1
SOURCE      Caenorhabditis elegans
  ORGANISM  Caenorhabditis elegans
            Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida;
            Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae;
            Caenorhabditis.
REFERENCE   1  (bases 1 to 17718942)
  AUTHORS   WormBase.
  CONSRTM   WormBase Consortium
  JOURNAL   Submitted (04-FEB-2024) to the INSDC. WormBase Group, European
            Bioinformatics Institute, Cambridge, CB10 1SA, UK. Email:
            help@wormbase.org
REFERENCE   2  (bases 1 to 17718942)
  AUTHORS   Sulson J.E., Waterston R.
  JOURNAL   Submitted (03-MAR-2003) to the INSDC. Nematode Sequencing Project:
            Sanger Institute, Hinxton, Cambridge CB10 1SA, UK and The Genome
            Institute at Washington University, St. Louis, MO 63110, USA.
REFERENCE   3  (bases 1 to 17718942)
  AUTHORS   Sulson J.E., Waterston R.
  CONSRTM   Caenorhabditis elegans Sequencing Consortium
  TITLE     Genome sequence of the nematode C. elegans: a platform for
            investigating biology
  JOURNAL   Science 282(5396), 2012-2018(1998).
COMMENT     Annotated features correspond to WormBase release WS292.
            Protein-coding gene structures below are the result of integration
            and manual review of the following types of data: ab initio
            predictions by Genefinder (P. Green and L. Hillier, pers. comm.);
            alignments to published proteins and cDNAs; genome sequence
            conservation with other nematodes (e.g. to C. briggsae using WABA:
            Genome Res. 2000. 10:1115-1125); sequence features (such as
            trans-splice and polyA sites).
            Sources of data: large-scale EST projects of Yuji Kohara
            (http://www.ddbj.nig.ac.jp/c-elegans/html/CE_INDEX.html); ORFeome
            cloning project (http://worfdb.dfci.harvard.edu); RST large-scale
            sequencing project (Genome Res. 2009. 19:2334-2342); IST library
            (Science. 2004. 303:540-3); RT-PCR EST set (Ewing B. Green P. 2010
            Unpublished); UTRome EST data submission (UTRome v1 Mangone M.
            Piano F. 2009); TEC-RED data (PNAS 2004. 101:1650-1655); RNA Deep
            sequencing data (454 read clusters - Makedonka Mitreva,
            unpublished; Illumina sequence data, Genome Res. 2009. 19:657-66);
            Numerous data sets from the modENCODE project (Science. 2010.
            330:1775-87); Individual C. elegans Nucleotide Database
            submissions; Personal communications with C. elegans researchers;
            Non-Coding gene structures below are derived using the following
            methods and data: ab initio prediction of tRNAs by tRNAscan-SE
            (Nucl. Acids. Res., 25, 955-964); integration and appraisal of
            miRNAs from miRBase (http://www.mirbase.org); integration and
            appraisal of RFAM predictions (rfam.sanger.ac.uk); 21U-RNAs (Cell.
            2006. 127:1193-1207); modENCODE data (Science. 2010. 330:1775-87);
            manual curation of novel published ncRNAs from the literature.
FEATURES             Qualifiers
     source          /organism="Caenorhabditis elegans"
                     /chromosome="X"
                     /strain="Bristol N2"
                     /mol_type="genomic DNA"
                     /db_xref="taxon:6239"
     protein         /transl_table=1
                     /gene="F14D12.1"
                     /locus_tag="CELE_F14D12.1"
                     /standard_name="F14D12.1a"
                     /note="Partially confirmed by transcript evidence"
                     /db_xref="EnsemblGenomes-Gn:WBGene00017463"
                     /db_xref="EnsemblGenomes-Tr:F14D12.1a"
                     /db_xref="GOA:H2KZ93"
                     /db_xref="InterPro:IPR011993"
                     /db_xref="InterPro:IPR037746"
                     /db_xref="UniProtKB/TrEMBL:H2KZ93"
                     /db_xref="WormBase:WBGene00017463"
     intron_pos      36:0 (1/17)
     intron_pos      83:1 (2/17)
     intron_pos      126:1 (3/17)
     intron_pos      156:0 (4/17)
     intron_pos      241:0 (5/17)
     intron_pos      282:2 (6/17)
     intron_pos      353:1 (7/17)
     intron_pos      387:1 (8/17)
     intron_pos      425:2 (9/17)
     intron_pos      491:0 (10/17)
     intron_pos      531:0 (11/17)
     intron_pos      574:0 (12/17)
     intron_pos      620:1 (13/17)
     intron_pos      678:2 (14/17)
     intron_pos      723:0 (15/17)
     intron_pos      760:1 (16/17)
     intron_pos      776:0 (17/17)
BEGIN
        1 MCLFVFADVT MKERVELNNN GRSIESHCKL FQNKKWEPRY IICKLQCDLE DPLLTVYKTC
       61 KDRQKNKAKQ SFLLRNYIGF EKSFPLKNKN QTLTVITKDH NVVLAFQLPE TLLQWETWFK
      121 NVGGQSTTHY MQLLKFPNQQ DNVSFINKEV RCHLHDSRLA IVHGYPAETL LYCEVAGASI
      181 TTDHMNHRVT ITPNDGSSEF LFCCPSIEMF SRLLKKANED DGSLNLYLNK KHAEGVWLQN
      241 IGNRTRKHQD SISGLSGTFS GWFNPMKPTT PSINQSEIFS SRAAINTLGI RNPGSKTPVG
      301 SLKFLNGLLP DLILSSPPVI TAAETPVVYP SQQITSTSES PVLSTTDNSP YLGSEAKQRS
      361 TSLPEYVNVS HVIRPTPPLP EEPSRTNHHE VIHRKASTMT TPARESPRFS NCGEHKDFMP
      421 NRIPSKGRSM MDFSTLPYED SGSRYESWRR AKKFISAFSQ KSHQDLYKSA PKIGKRKASS
      481 TSALTYRTHE SKHSFALSTS SSSEVDELPP PALNVAVTNP APPLIPRKDK SNEPEIIPAG
      541 LVRLREEGSL KMRGGVNIAL ARRLAAGING SFTKYDGDRG THVYPQTPEE KERKIEEFIE
      601 ERRRTASTRK VESPDFSNDV LGKVVSNETE KFRLMERRAS SVSFNKANAV QISLLNENQK
      661 KAAALITNHN RENSQSESMA SSSESLSSDA RSKISIKKRS NSPPRTVAPC ILPKQPSQRT
      721 LTLQQQSSSS IDSLNSTQTT RTTSSVRLPT RILVNQSSTS SEGSSGKSQH YFESKVGPKT
      781 SSTSHPSDSS HYILGRQDSR RMSEVLP
//