LOCUS       CCD73152.2               549 aa    PRT              CON 06-FEB-2024
DEFINITION  Caenorhabditis elegans RUN domain-containing protein protein.
ACCESSION   BX284606-136
PROTEIN_ID  CCD73152.2
SOURCE      Caenorhabditis elegans
  ORGANISM  Caenorhabditis elegans
            Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida;
            Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae;
            Caenorhabditis.
REFERENCE   1  (bases 1 to 17718942)
  AUTHORS   WormBase.
  CONSRTM   WormBase Consortium
  JOURNAL   Submitted (04-FEB-2024) to the INSDC. WormBase Group, European
            Bioinformatics Institute, Cambridge, CB10 1SA, UK. Email:
            help@wormbase.org
REFERENCE   2  (bases 1 to 17718942)
  AUTHORS   Sulson J.E., Waterston R.
  JOURNAL   Submitted (03-MAR-2003) to the INSDC. Nematode Sequencing Project:
            Sanger Institute, Hinxton, Cambridge CB10 1SA, UK and The Genome
            Institute at Washington University, St. Louis, MO 63110, USA.
REFERENCE   3  (bases 1 to 17718942)
  AUTHORS   Sulson J.E., Waterston R.
  CONSRTM   Caenorhabditis elegans Sequencing Consortium
  TITLE     Genome sequence of the nematode C. elegans: a platform for
            investigating biology
  JOURNAL   Science 282(5396), 2012-2018(1998).
COMMENT     Annotated features correspond to WormBase release WS292.
            Protein-coding gene structures below are the result of integration
            and manual review of the following types of data: ab initio
            predictions by Genefinder (P. Green and L. Hillier, pers. comm.);
            alignments to published proteins and cDNAs; genome sequence
            conservation with other nematodes (e.g. to C. briggsae using WABA:
            Genome Res. 2000. 10:1115-1125); sequence features (such as
            trans-splice and polyA sites).
            Sources of data: large-scale EST projects of Yuji Kohara
            (http://www.ddbj.nig.ac.jp/c-elegans/html/CE_INDEX.html); ORFeome
            cloning project (http://worfdb.dfci.harvard.edu); RST large-scale
            sequencing project (Genome Res. 2009. 19:2334-2342); IST library
            (Science. 2004. 303:540-3); RT-PCR EST set (Ewing B. Green P. 2010
            Unpublished); UTRome EST data submission (UTRome v1 Mangone M.
            Piano F. 2009); TEC-RED data (PNAS 2004. 101:1650-1655); RNA Deep
            sequencing data (454 read clusters - Makedonka Mitreva,
            unpublished; Illumina sequence data, Genome Res. 2009. 19:657-66);
            Numerous data sets from the modENCODE project (Science. 2010.
            330:1775-87); Individual C. elegans Nucleotide Database
            submissions; Personal communications with C. elegans researchers;
            Non-Coding gene structures below are derived using the following
            methods and data: ab initio prediction of tRNAs by tRNAscan-SE
            (Nucl. Acids. Res., 25, 955-964); integration and appraisal of
            miRNAs from miRBase (http://www.mirbase.org); integration and
            appraisal of RFAM predictions (rfam.sanger.ac.uk); 21U-RNAs (Cell.
            2006. 127:1193-1207); modENCODE data (Science. 2010. 330:1775-87);
            manual curation of novel published ncRNAs from the literature.
FEATURES             Qualifiers
     source          /organism="Caenorhabditis elegans"
                     /chromosome="X"
                     /strain="Bristol N2"
                     /mol_type="genomic DNA"
                     /db_xref="taxon:6239"
     protein         /transl_table=1
                     /gene="rund-1"
                     /locus_tag="CELE_T19D7.4"
                     /standard_name="T19D7.4"
                     /note="Confirmed by transcript evidence"
                     /db_xref="EnsemblGenomes-Gn:WBGene00020572"
                     /db_xref="EnsemblGenomes-Tr:T19D7.4"
                     /db_xref="GOA:Q22585"
                     /db_xref="InterPro:IPR004012"
                     /db_xref="InterPro:IPR037213"
                     /db_xref="UniProtKB/TrEMBL:Q22585"
                     /db_xref="WormBase:WBGene00020572"
     intron_pos      36:1 (1/10)
     intron_pos      58:2 (2/10)
     intron_pos      107:0 (3/10)
     intron_pos      183:0 (4/10)
     intron_pos      262:0 (5/10)
     intron_pos      305:2 (6/10)
     intron_pos      347:0 (7/10)
     intron_pos      451:0 (8/10)
     intron_pos      492:2 (9/10)
     intron_pos      515:1 (10/10)
BEGIN
        1 MMNELEASDL LVELGQSLKK RASEDSKEIV DGLDFYDTMS ETEWKSARLS SSHSDDIGSL
       61 NDALRVQQLE EEQERLNNSL FSLSSHFAQV QFRIKQMNEA DPSDRLKLLS DLQKFAFKGC
      121 TDMNELQRLR SESESGNDVL DKQNERQKEL LKQLREQVED LERTAYENGE GELPSTDILK
      181 KQKAVLDKLR EKIELNLDID KMNQTEIQRQ VDDALKQLVN PFKEKGQLVD QLQTQITDLE
      241 RFVNFLQKEN AENSNQTTPV RSMGSTPLSG AKSKNGSFLS GIIGCSTGRF QKNQLKNTLK
      301 GNHYGDERAH VQLAVDATQQ VLEKYTLLTF DSATKGQLEE VQVENDEVFE RSEEEVVTIV
      361 RKQLCLALKA LLEHGMLSET VVHKRIPGLG CFVAKSSADE KSTSLSHIWD VILYFYNLKT
      421 GRDTTDAPVR KLSQSFKLDH VGGRSITSKQ VLLTTIENII STHARLKRSK DAHWKAFVSA
      481 ALNEKKLPAW LRIIFRTRQV VEMCYNSWSY VARTGCEELY TLLEGLHKYS IHLPVDLALR
      541 PFEQIKDAF
//