LOCUS CCD73133.1 593 aa PRT CON 06-FEB-2024 DEFINITION Caenorhabditis elegans Phosphatidylinositol 4-kinase type 2 protein. ACCESSION BX284606-1105 PROTEIN_ID CCD73133.1 SOURCE Caenorhabditis elegans ORGANISM Caenorhabditis elegans Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis. REFERENCE 1 (bases 1 to 17718942) AUTHORS WormBase. CONSRTM WormBase Consortium JOURNAL Submitted (04-FEB-2024) to the INSDC. WormBase Group, European Bioinformatics Institute, Cambridge, CB10 1SA, UK. Email: help@wormbase.org REFERENCE 2 (bases 1 to 17718942) AUTHORS Sulson J.E., Waterston R. JOURNAL Submitted (03-MAR-2003) to the INSDC. Nematode Sequencing Project: Sanger Institute, Hinxton, Cambridge CB10 1SA, UK and The Genome Institute at Washington University, St. Louis, MO 63110, USA. REFERENCE 3 (bases 1 to 17718942) AUTHORS Sulson J.E., Waterston R. CONSRTM Caenorhabditis elegans Sequencing Consortium TITLE Genome sequence of the nematode C. elegans: a platform for investigating biology JOURNAL Science 282(5396), 2012-2018(1998). COMMENT Annotated features correspond to WormBase release WS292. Protein-coding gene structures below are the result of integration and manual review of the following types of data: ab initio predictions by Genefinder (P. Green and L. Hillier, pers. comm.); alignments to published proteins and cDNAs; genome sequence conservation with other nematodes (e.g. to C. briggsae using WABA: Genome Res. 2000. 10:1115-1125); sequence features (such as trans-splice and polyA sites). Sources of data: large-scale EST projects of Yuji Kohara (http://www.ddbj.nig.ac.jp/c-elegans/html/CE_INDEX.html); ORFeome cloning project (http://worfdb.dfci.harvard.edu); RST large-scale sequencing project (Genome Res. 2009. 19:2334-2342); IST library (Science. 2004. 303:540-3); RT-PCR EST set (Ewing B. Green P. 2010 Unpublished); UTRome EST data submission (UTRome v1 Mangone M. Piano F. 2009); TEC-RED data (PNAS 2004. 101:1650-1655); RNA Deep sequencing data (454 read clusters - Makedonka Mitreva, unpublished; Illumina sequence data, Genome Res. 2009. 19:657-66); Numerous data sets from the modENCODE project (Science. 2010. 330:1775-87); Individual C. elegans Nucleotide Database submissions; Personal communications with C. elegans researchers; Non-Coding gene structures below are derived using the following methods and data: ab initio prediction of tRNAs by tRNAscan-SE (Nucl. Acids. Res., 25, 955-964); integration and appraisal of miRNAs from miRBase (http://www.mirbase.org); integration and appraisal of RFAM predictions (rfam.sanger.ac.uk); 21U-RNAs (Cell. 2006. 127:1193-1207); modENCODE data (Science. 2010. 330:1775-87); manual curation of novel published ncRNAs from the literature. FEATURES Qualifiers source /organism="Caenorhabditis elegans" /chromosome="X" /strain="Bristol N2" /mol_type="genomic DNA" /db_xref="taxon:6239" protein /transl_table=1 /gene="ZC8.6" /locus_tag="CELE_ZC8.6" /standard_name="ZC8.6" /note="Confirmed by transcript evidence" /db_xref="EnsemblGenomes-Gn:WBGene00022501" /db_xref="EnsemblGenomes-Tr:ZC8.6" /db_xref="GOA:Q23083" /db_xref="InterPro:IPR000403" /db_xref="InterPro:IPR039756" /db_xref="UniProtKB/TrEMBL:Q23083" /db_xref="WormBase:WBGene00022501" intron_pos 9:1 (1/13) intron_pos 65:2 (2/13) intron_pos 98:1 (3/13) intron_pos 146:0 (4/13) intron_pos 189:0 (5/13) intron_pos 257:0 (6/13) intron_pos 311:1 (7/13) intron_pos 348:0 (8/13) intron_pos 366:1 (9/13) intron_pos 412:1 (10/13) intron_pos 457:0 (11/13) intron_pos 496:0 (12/13) intron_pos 527:1 (13/13) BEGIN 1 MNSGHPDSES SAISPSRRNI RMSSSGASES EVETCDENVG LLGSRGKKVK HERSNRAEQT 61 APLHRPLGSH ADEATIEFGG RSDYHDPYTS DDELLHTGSD AYGSTVGATI SLKFNEACRA 121 IHNGHYPQRI AQGSSGSYFV KNMHDEIIAV FKPKNEEPYG SLNPKWLKWI HRVFLPCCFG 181 RSCLPPNQGY LSEVGASLVD EKLKLGIVPP TGVVELAAPT FYYDRIDRAK ARTKERIQSR 241 YPNIGRRFHR IGLPEKTGSF QLFVKGYQDA AHWLRTWVNQ PETAPPPVTQ REFQFLFEKL 301 VALDYIIRNT DRGSDNWLIK YILADVIDRA PVHNNDVPCD PANAKPQVPG DEKLIDFVDS 361 EAKPDAGTAR VVDDPAPAEV EWADVSIPTV DVAAIDNGLA FPFKHPDEWR AYPFGWALLP 421 QAQIPFSDDI VDLLLPKLDD TNWVRELCGD LRRVFKNDKG FDKKIFEKQM SVMRGQIFNL 481 REALMKKKSP YQLIQMPPQL MVEVKQKKKK SRRSRNADYE EAPNYDSDAS TVVNTSGNVD 541 VEQPGPSTSA AAAATAGPST SDAGAASSTG GSKSWQETYE QKVQTKAPFF RWW //