LOCUS CCD70136.1 860 aa PRT CON 06-FEB-2024 DEFINITION Caenorhabditis elegans Ral guanine nucleotide dissociation stimulator-like 1 protein. ACCESSION BX284606-685 PROTEIN_ID CCD70136.1 SOURCE Caenorhabditis elegans ORGANISM Caenorhabditis elegans Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis. REFERENCE 1 (bases 1 to 17718942) AUTHORS WormBase. CONSRTM WormBase Consortium JOURNAL Submitted (04-FEB-2024) to the INSDC. WormBase Group, European Bioinformatics Institute, Cambridge, CB10 1SA, UK. Email: help@wormbase.org REFERENCE 2 (bases 1 to 17718942) AUTHORS Sulson J.E., Waterston R. JOURNAL Submitted (03-MAR-2003) to the INSDC. Nematode Sequencing Project: Sanger Institute, Hinxton, Cambridge CB10 1SA, UK and The Genome Institute at Washington University, St. Louis, MO 63110, USA. REFERENCE 3 (bases 1 to 17718942) AUTHORS Sulson J.E., Waterston R. CONSRTM Caenorhabditis elegans Sequencing Consortium TITLE Genome sequence of the nematode C. elegans: a platform for investigating biology JOURNAL Science 282(5396), 2012-2018(1998). COMMENT Annotated features correspond to WormBase release WS292. Protein-coding gene structures below are the result of integration and manual review of the following types of data: ab initio predictions by Genefinder (P. Green and L. Hillier, pers. comm.); alignments to published proteins and cDNAs; genome sequence conservation with other nematodes (e.g. to C. briggsae using WABA: Genome Res. 2000. 10:1115-1125); sequence features (such as trans-splice and polyA sites). Sources of data: large-scale EST projects of Yuji Kohara (http://www.ddbj.nig.ac.jp/c-elegans/html/CE_INDEX.html); ORFeome cloning project (http://worfdb.dfci.harvard.edu); RST large-scale sequencing project (Genome Res. 2009. 19:2334-2342); IST library (Science. 2004. 303:540-3); RT-PCR EST set (Ewing B. Green P. 2010 Unpublished); UTRome EST data submission (UTRome v1 Mangone M. Piano F. 2009); TEC-RED data (PNAS 2004. 101:1650-1655); RNA Deep sequencing data (454 read clusters - Makedonka Mitreva, unpublished; Illumina sequence data, Genome Res. 2009. 19:657-66); Numerous data sets from the modENCODE project (Science. 2010. 330:1775-87); Individual C. elegans Nucleotide Database submissions; Personal communications with C. elegans researchers; Non-Coding gene structures below are derived using the following methods and data: ab initio prediction of tRNAs by tRNAscan-SE (Nucl. Acids. Res., 25, 955-964); integration and appraisal of miRNAs from miRBase (http://www.mirbase.org); integration and appraisal of RFAM predictions (rfam.sanger.ac.uk); 21U-RNAs (Cell. 2006. 127:1193-1207); modENCODE data (Science. 2010. 330:1775-87); manual curation of novel published ncRNAs from the literature. FEATURES Qualifiers source /organism="Caenorhabditis elegans" /chromosome="X" /strain="Bristol N2" /mol_type="genomic DNA" /db_xref="taxon:6239" protein /transl_table=1 /gene="rgl-1" /locus_tag="CELE_F28B4.2" /standard_name="F28B4.2a" /note="Confirmed by transcript evidence" /db_xref="EnsemblGenomes-Gn:WBGene00017891" /db_xref="EnsemblGenomes-Tr:F28B4.2a" /db_xref="GOA:G4SFM6" /db_xref="InterPro:IPR000159" /db_xref="InterPro:IPR000651" /db_xref="InterPro:IPR001895" /db_xref="InterPro:IPR008937" /db_xref="InterPro:IPR019804" /db_xref="InterPro:IPR023578" /db_xref="InterPro:IPR029071" /db_xref="InterPro:IPR036964" /db_xref="UniProtKB/TrEMBL:G4SFM6" /db_xref="WormBase:WBGene00017891" intron_pos 36:0 (1/10) intron_pos 78:0 (2/10) intron_pos 111:2 (3/10) intron_pos 134:2 (4/10) intron_pos 248:0 (5/10) intron_pos 351:2 (6/10) intron_pos 528:2 (7/10) intron_pos 678:0 (8/10) intron_pos 757:0 (9/10) intron_pos 821:2 (10/10) BEGIN 1 MATRYWGDEK HPDAIYAVYL RKVRYVPPQG YEGVPRYRAI DPDRPKTESS EMSGADHLEW 61 ESVKEKLIKA GTVERLVECL VGSDDMMDSR HFNVFFATYR SFTDSAIVLD CLLRRYETLE 121 NEVNGSTSAL LVQNSIRQIV MCWLETYPED FYDSDKDFAM LSSLLDFGGR NKLTELRAKA 181 RKQREVFKRI YDEGGMQAAL PSLGQYVADM GFDPSDYPNN IKERVKMFDV GKENCVQIAE 241 QLTFWDAALF KELLIHQCQG CVWSKRRTAG ERVYTVKATI EQFNSVSQRV MTSIVLPDCR 301 PEYRAKIISK WIDIARELRA LKNFSSLKAV LSSLQSEPVH RLKSAWNSVP NRSISQFREL 361 SSIYETDEDG DQGNARKILE QEGTAKSSPL RRPQLIQNCR RTKSDVNLAE CQGTVPYLGN 421 FLTDLAMVDE STPDYTPENL INFEKRRKEF EVLAKLRLFQ SAARAYNIPM DRMFCAWFFF 481 LPCLDENECF NRSLEIEKPP MHSTPDLSSS RINSSMLSNG SQSTPVKNST LSRLFNSSRT 541 SEDSGSHNGN GTWHQHSHSY SSSTNSQIPS INTGSSLNIS DGGVPQHSRD SGLQCEDWID 601 GRLDGGPPGP VPLSGTSTLP RGSNTNTPSS ANASWTGGSE FTPSSLFPYS HSRSKSGESS 661 LQEVKTSMST RASADGTSGT QSLSRSATPI RTRLAEVFDS KVFSHQKKGS DASSCSSSSS 721 LSANGNSQAQ NSFYLARVGL DDDLQNTDGA NYKCIKIENG DRMPQLVARA LEKHLIEDDK 781 NTYLLVQLLP RGGEFVLPDN CNPFYAMAPD PTSPMLNLLL RKRDGNGTIE GGASPQLGPS 841 AKKLNRMKRT NLLRWSSGYL //