LOCUS       CCD66477.1               536 aa    PRT              CON 06-FEB-2024
DEFINITION  Caenorhabditis elegans Propionyl-CoA carboxylase beta
            chain, mitochondrial protein.
ACCESSION   BX284606-658
PROTEIN_ID  CCD66477.1
SOURCE      Caenorhabditis elegans
  ORGANISM  Caenorhabditis elegans
            Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida;
            Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae;
            Caenorhabditis.
REFERENCE   1  (bases 1 to 17718942)
  AUTHORS   WormBase.
  CONSRTM   WormBase Consortium
  JOURNAL   Submitted (04-FEB-2024) to the INSDC. WormBase Group, European
            Bioinformatics Institute, Cambridge, CB10 1SA, UK. Email:
            help@wormbase.org
REFERENCE   2  (bases 1 to 17718942)
  AUTHORS   Sulson J.E., Waterston R.
  JOURNAL   Submitted (03-MAR-2003) to the INSDC. Nematode Sequencing Project:
            Sanger Institute, Hinxton, Cambridge CB10 1SA, UK and The Genome
            Institute at Washington University, St. Louis, MO 63110, USA.
REFERENCE   3  (bases 1 to 17718942)
  AUTHORS   Sulson J.E., Waterston R.
  CONSRTM   Caenorhabditis elegans Sequencing Consortium
  TITLE     Genome sequence of the nematode C. elegans: a platform for
            investigating biology
  JOURNAL   Science 282(5396), 2012-2018(1998).
COMMENT     Annotated features correspond to WormBase release WS292.
            Protein-coding gene structures below are the result of integration
            and manual review of the following types of data: ab initio
            predictions by Genefinder (P. Green and L. Hillier, pers. comm.);
            alignments to published proteins and cDNAs; genome sequence
            conservation with other nematodes (e.g. to C. briggsae using WABA:
            Genome Res. 2000. 10:1115-1125); sequence features (such as
            trans-splice and polyA sites).
            Sources of data: large-scale EST projects of Yuji Kohara
            (http://www.ddbj.nig.ac.jp/c-elegans/html/CE_INDEX.html); ORFeome
            cloning project (http://worfdb.dfci.harvard.edu); RST large-scale
            sequencing project (Genome Res. 2009. 19:2334-2342); IST library
            (Science. 2004. 303:540-3); RT-PCR EST set (Ewing B. Green P. 2010
            Unpublished); UTRome EST data submission (UTRome v1 Mangone M.
            Piano F. 2009); TEC-RED data (PNAS 2004. 101:1650-1655); RNA Deep
            sequencing data (454 read clusters - Makedonka Mitreva,
            unpublished; Illumina sequence data, Genome Res. 2009. 19:657-66);
            Numerous data sets from the modENCODE project (Science. 2010.
            330:1775-87); Individual C. elegans Nucleotide Database
            submissions; Personal communications with C. elegans researchers;
            Non-Coding gene structures below are derived using the following
            methods and data: ab initio prediction of tRNAs by tRNAscan-SE
            (Nucl. Acids. Res., 25, 955-964); integration and appraisal of
            miRNAs from miRBase (http://www.mirbase.org); integration and
            appraisal of RFAM predictions (rfam.sanger.ac.uk); 21U-RNAs (Cell.
            2006. 127:1193-1207); modENCODE data (Science. 2010. 330:1775-87);
            manual curation of novel published ncRNAs from the literature.
FEATURES             Qualifiers
     source          /organism="Caenorhabditis elegans"
                     /chromosome="X"
                     /strain="Bristol N2"
                     /mol_type="genomic DNA"
                     /db_xref="taxon:6239"
     protein         /transl_table=1
                     /gene="pccb-1"
                     /locus_tag="CELE_F52E4.1"
                     /standard_name="F52E4.1a"
                     /note="Confirmed by transcript evidence"
                     /db_xref="EnsemblGenomes-Gn:WBGene00018701"
                     /db_xref="EnsemblGenomes-Tr:F52E4.1a.1"
                     /db_xref="EnsemblGenomes-Tr:F52E4.1a.2"
                     /db_xref="GOA:Q20676"
                     /db_xref="InterPro:IPR011762"
                     /db_xref="InterPro:IPR011763"
                     /db_xref="InterPro:IPR029045"
                     /db_xref="InterPro:IPR034733"
                     /db_xref="UniProtKB/TrEMBL:Q20676"
                     /db_xref="WormBase:WBGene00018701"
     intron_pos      20:0 (1/3)
     intron_pos      60:0 (2/3)
     intron_pos      396:1 (3/3)
BEGIN
        1 MLSRFARQLA LPVFNGVLHP TRATSSIAHT IKVAHKIDET REKALLGGGK KRVDAQHARG
       61 KLTARERIDL LLDRNTFREY DMFAEHTCND FGMQKEKYPG DSVVTGRGEI NGRTVFVFSQ
      121 DFTVFGGSLS SIHAKKIVKI MREAMLVGAP VIGLNDSGGA RIQEGVESLA GYADIFQENV
      181 MASGVVPQIS MIMGPCAGGA VYSPALTDFT FMVRDTSYLF ITGPDVVKAV TNEEVTQEEL
      241 GGAKTHTVTS GVAHGAFDND VDALMSLREL FNYLPLSNTD AAPIRAAEDP WDRAVPSLDT
      301 VVPLESTAAY NMKDVVHALV DEGDFFEIMP DYAKNLVIGF ARMNGRTVGI VGNNPKFAAG
      361 CLDINSSVKG ARFVRFCDAF NIPIITLVDV PGFLPGTAQE YGGIIRHGAK LLYAFAEATV
      421 PKITIITRKA FGGAYDVMSS KHLRGDINYA WPTAEVAVMG AKGAVSILFR NDKEHAVQHE
      481 EEYTELFSNP FPAAVRGFVD DIIIPSETRK KVCEDLNMLE SKKLKNPWKK HGNIPL
//