LOCUS CCD62905.2 1046 aa PRT CON 06-FEB-2024 DEFINITION Caenorhabditis elegans Uncharacterized protein protein. ACCESSION BX284606-68 PROTEIN_ID CCD62905.2 SOURCE Caenorhabditis elegans ORGANISM Caenorhabditis elegans Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis. REFERENCE 1 (bases 1 to 17718942) AUTHORS WormBase. CONSRTM WormBase Consortium JOURNAL Submitted (04-FEB-2024) to the INSDC. WormBase Group, European Bioinformatics Institute, Cambridge, CB10 1SA, UK. Email: help@wormbase.org REFERENCE 2 (bases 1 to 17718942) AUTHORS Sulson J.E., Waterston R. JOURNAL Submitted (03-MAR-2003) to the INSDC. Nematode Sequencing Project: Sanger Institute, Hinxton, Cambridge CB10 1SA, UK and The Genome Institute at Washington University, St. Louis, MO 63110, USA. REFERENCE 3 (bases 1 to 17718942) AUTHORS Sulson J.E., Waterston R. CONSRTM Caenorhabditis elegans Sequencing Consortium TITLE Genome sequence of the nematode C. elegans: a platform for investigating biology JOURNAL Science 282(5396), 2012-2018(1998). COMMENT Annotated features correspond to WormBase release WS292. Protein-coding gene structures below are the result of integration and manual review of the following types of data: ab initio predictions by Genefinder (P. Green and L. Hillier, pers. comm.); alignments to published proteins and cDNAs; genome sequence conservation with other nematodes (e.g. to C. briggsae using WABA: Genome Res. 2000. 10:1115-1125); sequence features (such as trans-splice and polyA sites). Sources of data: large-scale EST projects of Yuji Kohara (http://www.ddbj.nig.ac.jp/c-elegans/html/CE_INDEX.html); ORFeome cloning project (http://worfdb.dfci.harvard.edu); RST large-scale sequencing project (Genome Res. 2009. 19:2334-2342); IST library (Science. 2004. 303:540-3); RT-PCR EST set (Ewing B. Green P. 2010 Unpublished); UTRome EST data submission (UTRome v1 Mangone M. Piano F. 2009); TEC-RED data (PNAS 2004. 101:1650-1655); RNA Deep sequencing data (454 read clusters - Makedonka Mitreva, unpublished; Illumina sequence data, Genome Res. 2009. 19:657-66); Numerous data sets from the modENCODE project (Science. 2010. 330:1775-87); Individual C. elegans Nucleotide Database submissions; Personal communications with C. elegans researchers; Non-Coding gene structures below are derived using the following methods and data: ab initio prediction of tRNAs by tRNAscan-SE (Nucl. Acids. Res., 25, 955-964); integration and appraisal of miRNAs from miRBase (http://www.mirbase.org); integration and appraisal of RFAM predictions (rfam.sanger.ac.uk); 21U-RNAs (Cell. 2006. 127:1193-1207); modENCODE data (Science. 2010. 330:1775-87); manual curation of novel published ncRNAs from the literature. FEATURES Qualifiers source /organism="Caenorhabditis elegans" /chromosome="X" /strain="Bristol N2" /mol_type="genomic DNA" /db_xref="taxon:6239" protein /transl_table=1 /gene="C04E7.3" /locus_tag="CELE_C04E7.3" /standard_name="C04E7.3" /note="Confirmed by transcript evidence" /db_xref="EnsemblGenomes-Gn:WBGene00015430" /db_xref="EnsemblGenomes-Tr:C04E7.3" /db_xref="WormBase:WBGene00015430" intron_pos 20:1 (1/10) intron_pos 160:0 (2/10) intron_pos 530:0 (3/10) intron_pos 583:0 (4/10) intron_pos 633:2 (5/10) intron_pos 678:0 (6/10) intron_pos 696:1 (7/10) intron_pos 750:2 (8/10) intron_pos 771:0 (9/10) intron_pos 1030:1 (10/10) BEGIN 1 MNVNDPPDIR AIPNFTAQTD TPIMSSHDFT HPVRYTNKNQ PGRNSLSRHE SGDSSRSTQG 61 HASLPRNTVG PPDPNALSPE GLVSRPLNTG VGPNQQVQEQ YNAFSNQNEN DRKMMEDPRE 121 SAVPNKRAAA APPWIGYTQT YQGQQKYRNP QKLQQSTIKK RPKPETTSGP KKASKPTSLS 181 EPKKTECSIS EDELLSASLA ERVQAEVSEN EQIENLTEWA QAYKQKQEKS SETKRRSRKT 241 AHREEEQKSK ILTVPIGSLS EDQAVKQLKE LTKERRRDDA LVAEPSAKKK WQQKEVESKK 301 NEGTSFEKVS DQVRLRTMIE DLVLQNENLQ PVEWSGSEMA LKRDNDRYQR RSQLKTANNR 361 ELAKKMMSME RNEVDFLRNA RYSKHGNLKV WNQFKSLVKA NKLLEEEIIN QKCQELHEIK 421 FKTAAKPSLA IEKSTPTYLE NMLIVDDQEK VKNIDISYLS KVNPSHHYQW GEAKWKKIEP 481 LLAELKETEN EVNCYYENTM GHDVPQTSLK TVDKILWHFE HKYDAITCTM YPQQIFYGDF 541 ELEILNSASI SFILDADKPK MKLCLSDGAC DVLGFDVITN ITMVPSQAQN FPPCVFVRTK 601 NIDGRIINLS DKYGRFRRGS YFGDKPIHQC HPSGLFLVLG FNPNHKQTQC TVTVDKENKL 661 KCYKISASAG FEVLATNVQL SLAMYPKSFN INVCFDFMRD QEFRNFIINL RIIWVLIANQ 721 NCEPRWIAKN REDLLLMCDS NFVEFDAETG QTHSLYPPTH SFRPLRREKS GDTVNNLNTC 781 MLQPHPSPTA KRHENPRSPV FKVPRKFVSK RENIQALILR KNNKLLIKKS NVDCDGLNVV 841 VVAKPFIIPT IQNQNGTTYS FEETCPPVKK FKWNDGHSLK IVTISQGKAS SLYDPHLPTV 901 GFDGTSPSTS NKAPMVSNEF SCLSGEPFPS SCYHISKQVR FARKQDEQTI SLPNTVEELA 961 FNVRSTIASR RMETRRLINL GEPPAPSTSP VDEIMESGEF GPTKPLTLRL GHNEFYISNM 1021 SEQDQLNQAI LVPGRPSPRD SHKFGK //