LOCUS       CCA94187.1               508 aa    PRT              BCT 27-FEB-2015
DEFINITION  Novosphingobium sp. PP1Y RNA polymerase sigma-54 factor protein.
ACCESSION   FR856862-3210
PROTEIN_ID  CCA94187.1
SOURCE      Novosphingobium sp. PP1Y
  ORGANISM  Novosphingobium sp. PP1Y
            Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales;
            Sphingomonadaceae; Novosphingobium; unclassified Novosphingobium.
REFERENCE   1  (bases 1 to 3911486)
  AUTHORS   Petrillo M.
  JOURNAL   Submitted (02-MAY-2011) to the INSDC. Bioinformatic, Ceinge
            Biotecnologie Avanzate, Via Gaetano Salvatore, 486 Naples, 80145,
            ITALY.
REFERENCE   2
  AUTHORS   D'Argenio V., Petrillo M., Cantiello P., Naso B., Cozzuto L.,
            Notomista E., Paolella G., Di Donato A., Salvatore F.
  TITLE     De novo sequencing and assembly of the whole genome of
            Novosphingobium sp. strain PP1Y
  JOURNAL   J. Bacteriol. 193(16), 4296-4296(2011).
   PUBMED   21685292
FEATURES             Qualifiers
     source          /organism="Novosphingobium sp. PP1Y"
                     /strain="PP1Y"
                     /mol_type="genomic DNA"
                     /db_xref="taxon:702113"
     protein         /transl_table=11
                     /locus_tag="PP1Y_AT34615"
                     /note="assigned by KAAS to KEGG Orthology:K03092 RNA
                     polymerase sigma-54 factor"
                     /db_xref="EnsemblGenomes-Gn:PP1Y_AT34615"
                     /db_xref="EnsemblGenomes-Tr:CCA94187"
                     /db_xref="GOA:F6IIW9"
                     /db_xref="InterPro:IPR000394"
                     /db_xref="InterPro:IPR007046"
                     /db_xref="InterPro:IPR007634"
                     /db_xref="InterPro:IPR038709"
                     /db_xref="UniProtKB/TrEMBL:F6IIW9"
                     /inference="protein motif:COG:COG1508"
                     /inference="similar to AA sequence:UniProt:P30333"
BEGIN
        1 MALGPRLDLR QSQSLVMTPQ LQQAIKLLAL SNLEVETFIG EALDANPLLD VGAEPAPPPV
       61 ETVEMPEEAR RTTLEGSPVD QLIGEGRASD DRPLDIDAGS LDRDRDTGDG ELTGNSTSGT
      121 ADNWASEFRM AGGEAGPGIE DHAGGAASLA EHLQAQVGSE AFNPVEAGIA RYIIGLLDDA
      181 GYLHASLAEL AADLGVSEDA VEDALILVQS LDPTGVGARS LSECIALQAR EADRYDPCMA
      241 RLIDNLDLVA KGELARLKRM CGVDDEDFAD MLAELRSYDP KPGARFGGEA SGAVTPDILV
      301 TPRSDGGWDI ALNQATLPRL IVNRGYYVEL KGTCEDKTSR AWLSEKLADA NWLIKALDQR
      361 QKTILKVASE LVKQQDGFFR HGVSQLKPLT LRAVAEAIGM HESTVSRVTS NKFLNCPRGT
      421 YELKYFFSSG VSGAGGEGAA SAEAVKAAIK QLIDAEDPKA ILSDDALVEL LNGKGFALAR
      481 RTVAKYREAI GLGSSVQRRR QKALAAAR
//