LOCUS CBA32415.1 378 aa PRT BCT 22-MAR-2010 DEFINITION Curvibacter putative symbiont of Hydra magnipapillata Twitching mobility protein protein. ACCESSION FN543107-427 PROTEIN_ID CBA32415.1 SOURCE Curvibacter putative symbiont of Hydra magnipapillata ORGANISM Curvibacter putative symbiont of Hydra magnipapillata Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Curvibacter. REFERENCE 1 (bases 1 to 564641) AUTHORS Rattei T. JOURNAL Submitted (16-AUG-2009) to the INSDC. Rattei T., Genome Oriented Bioinformatics, Technische Universitaet Muenchen, Am Forum 1, Bavaria, 85354 Freising, GERMANY. REFERENCE 2 AUTHORS Chapman J.A., Kirkness E.F., Simakov O., Hampson S.E., Mitros T., Weinmaier T., Rattei T., Balasubramanian P.G., Borman J., Busam D., Disbennett K., Pfannkoch C., Sumin N., Sutton G., Viswanathan L., Walenz B., Goodstein D.M., Hellsten U., Kawashima T., Prochnik S.E., Putnam N.H., Shu S., Blumberg B., Dana C.E., Gee L., Kibler D.F., Law L., Lindgens D., Martinez D.E., Peng J., Wigge P.A., Bertulat B., Guder C., Nakamura Y., Ozbek S., Watanabe H., Khalturin K., Hemmrich G., Franke A., Augustin R., Fraune S., Hayakawa E., Hayakawa S., Hirose M., Hwang J., Ikeo K., Nishimiya-Fujisawa C., Ogura A., Takahashi T., Steinmetz P.R., Zhang X., Aufschnaiter R., Eder M.K., Gorny A.K., Salvenmoser W., Heimberg A.M., Wheeler B.M., Peterson K.J., Boettger A., Tischler P., Wolf A., Gojobori T., Remington K.A., Strausberg R.L., Venter J., Technau U., Hobmayer B., Bosch T.C., Holstein T.W., Fujisawa T., Bode H.R., David C.N., Rokhsar D.S., Steele R.E. TITLE The dynamic genome of Hydra JOURNAL Nature 464(7288), 592-596(2010). PUBMED 20228792 COMMENT The assembly of the Hydra magnipapillata yielded eight large putatively bacterial scaffolds as evidenced by: (1) high G+C content (in contrast to the low G+C content of the Hydra genome) (2) no high-copy repeat sequences typical of Hydra scaffolds (3) closely spaced single-exon ORFs with best hits to bacterial genes. These scaffolds spanned a total of 4 Mbp and represent an estimated 98% of the bacterial chromosome. Phylogenetic analysis of 16S rRNA and conserved clusters of orthologous groups of proteins (COGs) indicate that this bacterium is a novel Curvibacter species belonging to the family Comamonadaceae (order Burkholderiales). FEATURES Qualifiers source /organism="Curvibacter putative symbiont of Hydra magnipapillata" /mol_type="genomic DNA" /clone="HmaUn_WGA71069_1" /db_xref="taxon:667019" protein /transl_table=11 /gene="pilT" /locus_tag="Csp_D32030" /db_xref="GOA:C9YF47" /db_xref="InterPro:IPR001482" /db_xref="InterPro:IPR006321" /db_xref="InterPro:IPR027417" /db_xref="UniProtKB/TrEMBL:C9YF47" /inference="similar to AA sequence:UniProtKB/Swiss-Prot:P24559" BEGIN 1 MERDQATKFI NDLLKLMVSR NGSDLFITAE FPPAIKVDGK VTKVSPQPLN SAHTMALARS 61 IMNDKQIAEF ERTKESNFAI APATIGRFRV NAFIQQGKVG MVLRVIPQVL PTIDGLGVPQ 121 ILKDIVQSKR GLCILVGATG SGKSTTLAAM VDWRNENSYG HIITIEDPVE FVHAHKNCVI 181 TQREVGLDTD SWDAALKNTL RQAPDVILMG EIRDRETMEH AIAFSETGHL CLATLHANSA 241 NQALDRVINF FPEERRSQLL MDLSLNLRAM VSQRLIPKQD GKGRVAAVEV MINSPLISDL 301 IFKGEVSEVK EIMKKSRQAG MQTFDQALFD LYEGHAITYE DALRNADSLN DLRLQIKLNS 361 HRGKSQDLSA GTENFAIM //