LOCUS CBA28121.1 2624 aa PRT BCT 16-AUG-2011 DEFINITION Curvibacter putative symbiont of Hydra magnipapillata hypothetical protein protein. ACCESSION FN543104-570 PROTEIN_ID CBA28121.1 SOURCE Curvibacter putative symbiont of Hydra magnipapillata ORGANISM Curvibacter putative symbiont of Hydra magnipapillata Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Curvibacter. REFERENCE 1 (bases 1 to 1568541) AUTHORS Rattei T. JOURNAL Submitted (16-AUG-2009) to the INSDC. Rattei T., Genome Oriented Bioinformatics, Technische Universitaet Muenchen, Am Forum 1, Bavaria, 85354 Freising, GERMANY. REFERENCE 2 AUTHORS Chapman J.A., Kirkness E.F., Simakov O., Hampson S.E., Mitros T., Weinmaier T., Rattei T., Balasubramanian P.G., Borman J., Busam D., Disbennett K., Pfannkoch C., Sumin N., Sutton G., Viswanathan L., Walenz B., Goodstein D.M., Hellsten U., Kawashima T., Prochnik S.E., Putnam N.H., Shu S., Blumberg B., Dana C.E., Gee L., Kibler D.F., Law L., Lindgens D., Martinez D.E., Peng J., Wigge P.A., Bertulat B., Guder C., Nakamura Y., Ozbek S., Watanabe H., Khalturin K., Hemmrich G., Franke A., Augustin R., Fraune S., Hayakawa E., Hayakawa S., Hirose M., Hwang J., Ikeo K., Nishimiya-Fujisawa C., Ogura A., Takahashi T., Steinmetz P.R., Zhang X., Aufschnaiter R., Eder M.K., Gorny A.K., Salvenmoser W., Heimberg A.M., Wheeler B.M., Peterson K.J., Boettger A., Tischler P., Wolf A., Gojobori T., Remington K.A., Strausberg R.L., Venter J., Technau U., Hobmayer B., Bosch T.C., Holstein T.W., Fujisawa T., Bode H.R., David C.N., Rokhsar D.S., Steele R.E. TITLE The dynamic genome of Hydra JOURNAL Nature 464(7288), 592-596(2010). PUBMED 20228792 COMMENT The assembly of the Hydra magnipapillata yielded eight large putatively bacterial scaffolds as evidenced by: (1) high G+C content (in contrast to the low G+C content of the Hydra genome) (2) no high-copy repeat sequences typical of Hydra scaffolds (3) closely spaced single-exon ORFs with best hits to bacterial genes. These scaffolds spanned a total of 4 Mbp and represent an estimated 98% of the bacterial chromosome. Phylogenetic analysis of 16S rRNA and conserved clusters of orthologous groups of proteins (COGs) indicate that this bacterium is a novel Curvibacter species belonging to the family Comamonadaceae (order Burkholderiales). FEATURES Qualifiers source /organism="Curvibacter putative symbiont of Hydra magnipapillata" /mol_type="genomic DNA" /clone="HmaUn_WGA69518_1" /db_xref="taxon:667019" protein /transl_table=11 /locus_tag="Csp_A05700" /db_xref="GOA:C9Y8W9" /db_xref="InterPro:IPR000421" /db_xref="InterPro:IPR002884" /db_xref="InterPro:IPR008979" /db_xref="InterPro:IPR011049" /db_xref="InterPro:IPR013783" /db_xref="InterPro:IPR019960" /db_xref="InterPro:IPR036852" /db_xref="InterPro:IPR041498" /db_xref="UniProtKB/TrEMBL:C9Y8W9" BEGIN 1 MQDDGATRIA VAAANGYTTA VSGLAQALSF RAWSGLDAAG QKASNGLLVT APAQTGVGTA 61 FGELLNSATW VVTGAVAVSD VRLVQDSGVQ GDGITRNPAL TAPANVAWGV SVDYRWQKDG 121 GNWSDWRSSY TPPATDGKAD GAYTVQVRQR NAQGESATQS LAFVLDSQVA APVVATQQLR 181 YIRVYHSDAQ TPLALSELKV MSGSTNLAAG KTATLSADSG YATHGANNTA ALTDGGADGW 241 WNGASGAGSN ITVAGGSTKP YMELDLGALQ NVDTIVLSSV ADVFTKATNI RVYASASSMA 301 GQTYSQLASN ANVKSFDVAN LMGLTSTWSG LGVAAQPMLS GTGEVGATVD IFDTAAVSVS 361 NTSGQIGSAV VQSDGSWRWQ ASSIVSGSHT ITTQQTDRAG NKSALSSGYS FTVNGTLMGT 421 PALDAASDSG TLGDTTTNVT APTLVGMGVS SGGSVEIYDN GSKVATVTAT VSPSGPRWTY 481 TPASSLASGV HSITAKDVGT GKTSAALALN IDTSAAAPSI TAPAASITNV APVISGTGAE 541 AFATVTLMAT PSSGAAAQTF ITVADASGAW RLDTGINTVA DASGAWRVDT GINTGSNGLN 601 TALNTALVPN QLYTLRASQT DVAGNTSALS SAQAVNYDTL ALAPTINPVP ASVASMFTLS 661 GTGEAGATVR VYDAQGGSTN TLGTATVQAN GSWALLAQGL AAGAHSFRAE QTDLAGNRSG 721 QTTALSSAGT TDVTVSTSAL SAPMLTLASD SGVLGDGITK VTTPSWSGQA AAGATVEVWD 781 SFNGVSSKVG SATANASGVW TLGATTSTLG EGKHSLVAKE LAADGVTVRR TSDAAALTID 841 TTPLGVPTMG LTSSSDSGAV GDSVTNVVLP TLTGTVDANA WVNVYRGGST LLGTAQANGS 901 GVWRYTVGTV LADGTIGFTA RQLDAAGNEG AASTVLNLSV DTDVSNTVRY LTLAKVSGNL 961 GFYQRLQEIA VYTDNGKKLD LRALGGTALS NYGSVPGLID GAGGDVTIDN PGSSLSWVRI 1021 DLTGFYRVSR IEVTVASDNP TRSNNYQVYG SSFDTGTGGG INYSASNPPS ADARLKYLGT 1081 VNASTPGQTV VFDQTLQTLG VLNVTPLQSG AQGVAPAPVL QGSGEAGAKV EVFDTVAGIR 1141 SSLGSTTVQA DGNWRWQASG IVSGSHTISV QQIDVAGNKS PVSSAYNFTV DSMLMGMPTL 1201 DAASDRGTLG DYTTNLTLPT FKGIALSVGD GSNAVQVWDN GKLLGNATIE SDKTWSLTPG 1261 NPLASGVHSI TVTDVAAGKT SNALALNIDT VCTVPVINAV ADSASAPVVT GTGEAGATIT 1321 LTATPADGTA VQTFTARVKA DGTWSVDIGA VQGSQALVQG KAYTLFATAT DVAGNTAAAA 1381 AVQHVLYDNV MNAQLQAADW RMDLASKGTL DAGDVLRLTF DQAVALTTAS LPTAVLGTGA 1441 LVAAVEPVAG KSRFWDVKLG TGQTLGGAAA GVTGSALAQA WALTGVSDAV GNAGTVNVGA 1501 GSLTALTAQV QAKQAPSWQV SMADVQDAGT LVQGWATPSA SLKLNWGGQV TAAFTADAQG 1561 YWSYSFYKNE SYFGRKVPQL GTDQTMSLLQ VNADTSTTTL WSQTARVEST PQATAMALPA 1621 GATARPLSVQ LAVRAGRSVA LDVRDATQDM PAGTWQVRVA GLAAYHTLNR GSRDSAGVWT 1681 VDASDWADLR VNTTTNTVQE DRVLTLSYQQ KQGSGPTATW VTQRQASVGL SVVPWVQIAA 1741 GVPTVDAQGF TQVQQVWNLG LKGLNGAGIT IGIHEGTSID INNVNNFELG NVLAGTYTTN 1801 GYYHGHRVGQ RAVGNFDGPF VGIAYGANIR WYDAPLGMDV TNWSVSTGAL DRWAWNDVDV 1861 TQRNGLGNVW AVAGSNYDGY MTALMRSTKG VTGITVTATD PVSGGWGGLS TGPGLWVAHP 1921 AWSTSEATPS VSGQAAMMLQ ANPGLGTRDV KNILALAATY YTTATPLDSF ALNGARSLNG 1981 AGLHYSTYVG FGVSNVFNAV RLAADWLADG SAPKVMTNWQ TNSATVATTP VSVAKTANTV 2041 TTVSVVVTDD VKLEALQIMC NINSDSFDKM RMVVTSPSGT QSVLANGTSA ASFNDMLLMT 2101 SNAFFGESSR GTWKVSFEFN ADATSAGAVS NLYLQLFGVV NEVNDKYVYT DQFGLHWQLA 2161 DTRTRAQMGW LSDLNGGNDS LMLSAMNTDV QVHLGRHGWL TSPSYKVLMA PGTRIENAFG 2221 GDGSDVLVGL PNAKSILRGN EGNDLLLAYG SGSTLDGGNA DDWLWLGGNT SATGGQGNDR 2281 FVVFQGEGTL TSTAAVRARM SDFDATQDSL MVYNTAGNFK LAQFDASGNL SGWAAVSNAS 2341 VLQTLRSQLA QSDAPDVLGV AVSGSASAPT LTLTWDQSPL HPTGSTVGSY AGWKLNGVAP 2401 AAATLTGGSL SLGYSGVGTG TGVYVLDTSD SQLYSTLGVK LGYQKIYVGS AGADTVDASG 2461 QSAAVAVFGQ GGSDVLTGGA GADLLVAAGL TAANVQVRMI GGQGADVFRL DMGIGNVGSG 2521 SVGGGSAGSG SASGRLQVSD FSLAQGDRLD LDALLQTIAH TQFVEDCVQI SRQNNDAVLA 2581 FDLSGQKAFA TSAFTVLLDN VYTQTTDITL RTLTYGSGMG AVLG //