LOCUS CAR97831.2 1131 aa PRT CON 06-FEB-2024 DEFINITION Caenorhabditis elegans protein kinase C protein. ACCESSION BX284606-2453 PROTEIN_ID CAR97831.2 SOURCE Caenorhabditis elegans ORGANISM Caenorhabditis elegans Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis. REFERENCE 1 (bases 1 to 17718942) AUTHORS WormBase. CONSRTM WormBase Consortium JOURNAL Submitted (04-FEB-2024) to the INSDC. WormBase Group, European Bioinformatics Institute, Cambridge, CB10 1SA, UK. Email: help@wormbase.org REFERENCE 2 (bases 1 to 17718942) AUTHORS Sulson J.E., Waterston R. JOURNAL Submitted (03-MAR-2003) to the INSDC. Nematode Sequencing Project: Sanger Institute, Hinxton, Cambridge CB10 1SA, UK and The Genome Institute at Washington University, St. Louis, MO 63110, USA. REFERENCE 3 (bases 1 to 17718942) AUTHORS Sulson J.E., Waterston R. CONSRTM Caenorhabditis elegans Sequencing Consortium TITLE Genome sequence of the nematode C. elegans: a platform for investigating biology JOURNAL Science 282(5396), 2012-2018(1998). COMMENT Annotated features correspond to WormBase release WS292. Protein-coding gene structures below are the result of integration and manual review of the following types of data: ab initio predictions by Genefinder (P. Green and L. Hillier, pers. comm.); alignments to published proteins and cDNAs; genome sequence conservation with other nematodes (e.g. to C. briggsae using WABA: Genome Res. 2000. 10:1115-1125); sequence features (such as trans-splice and polyA sites). Sources of data: large-scale EST projects of Yuji Kohara (http://www.ddbj.nig.ac.jp/c-elegans/html/CE_INDEX.html); ORFeome cloning project (http://worfdb.dfci.harvard.edu); RST large-scale sequencing project (Genome Res. 2009. 19:2334-2342); IST library (Science. 2004. 303:540-3); RT-PCR EST set (Ewing B. Green P. 2010 Unpublished); UTRome EST data submission (UTRome v1 Mangone M. Piano F. 2009); TEC-RED data (PNAS 2004. 101:1650-1655); RNA Deep sequencing data (454 read clusters - Makedonka Mitreva, unpublished; Illumina sequence data, Genome Res. 2009. 19:657-66); Numerous data sets from the modENCODE project (Science. 2010. 330:1775-87); Individual C. elegans Nucleotide Database submissions; Personal communications with C. elegans researchers; Non-Coding gene structures below are derived using the following methods and data: ab initio prediction of tRNAs by tRNAscan-SE (Nucl. Acids. Res., 25, 955-964); integration and appraisal of miRNAs from miRBase (http://www.mirbase.org); integration and appraisal of RFAM predictions (rfam.sanger.ac.uk); 21U-RNAs (Cell. 2006. 127:1193-1207); modENCODE data (Science. 2010. 330:1775-87); manual curation of novel published ncRNAs from the literature. FEATURES Qualifiers source /organism="Caenorhabditis elegans" /chromosome="X" /strain="Bristol N2" /mol_type="genomic DNA" /db_xref="taxon:6239" protein /transl_table=1 /gene="pkn-1" /locus_tag="CELE_F46F6.2" /standard_name="F46F6.2b" /note="Confirmed by transcript evidence" /db_xref="EnsemblGenomes-Gn:WBGene00009793" /db_xref="EnsemblGenomes-Tr:F46F6.2b" /db_xref="GOA:G5EGE3" /db_xref="InterPro:IPR000719" /db_xref="InterPro:IPR000961" /db_xref="InterPro:IPR008271" /db_xref="InterPro:IPR011009" /db_xref="InterPro:IPR011072" /db_xref="InterPro:IPR017441" /db_xref="InterPro:IPR017892" /db_xref="InterPro:IPR035892" /db_xref="InterPro:IPR036274" /db_xref="InterPro:IPR037313" /db_xref="UniProtKB/TrEMBL:G5EGE3" /db_xref="WormBase:WBGene00009793" intron_pos 160:2 (1/9) intron_pos 258:1 (2/9) intron_pos 566:0 (3/9) intron_pos 639:1 (4/9) intron_pos 673:1 (5/9) intron_pos 715:0 (6/9) intron_pos 972:1 (7/9) intron_pos 1037:0 (8/9) intron_pos 1086:0 (9/9) BEGIN 1 MDYHSNGNGI NGMNGSSRHS ADGPSTPTHS GNGHSNGEGN RYALSAHRNV VKPLGSNFGA 61 SGSATTSTPK SVISSLTSAC NNSPVLSFTR GVLRASRKKI RPLFSTFSTS SNTGYYRFES 121 PSSSLNAYYP QESFNGPILK MITCTESPPR SLDVLKRSKS TYWETAPAEM VELADKYNFT 181 INEGSSIQQE ALELRSVIRK DLTKKLKIKS GYSRIKLITS DRRQSEFLRY ELSDLNEQIA 241 DLQEDLQALE MYNSGAFDED VMYLDNLEDC DVENGPPSKL VILQLELEKE LKVKRGLEQF 301 LRGAPDKSKV HGDSQSLLDD SRAKIAMLRM QIERLSQEAP AVEGEPKTKV ELAIDDLIIR 361 FHKEKLIMDG SRNMIRILRS KRKPDSKAVD EAMNSYVIAS EKADLIKLAL LKYASSLPLE 421 HDHRKYLIGE INSGLIPKPP SLSQDRNSPS SEDGGNGTST SRRCSFMPYS LQISGCLEVT 481 INGCAGILSE VFERKIRKDV PGVPGFISVY GMDASGKKKK SARGPNSSEE VFCVLRIDNR 541 FIGATELRKI VDRNWDQKFD VDLDRSRELQ IELFYHDDRS MCGFAAVKLS NLIETSSKVG 601 IIVPVEPQGN IFVQFKYMNP VVSRKPKLER QRRLFRVKES NDGARQKLGV FAFSRLIKNR 661 GNEPSEKFAA FTGFTPMPSS SSQHQPGTSS SGPSTSSSIA STPTPSTSNS LFDKSFNPRK 721 SAKKREAREA AAVAPMTAAV AAVNLNAPST SNSMQPSTQE RNLVVDEFPT DRSGPSQAPP 781 VPAVRHIDFF ASSDGAPLTV EQFRLISVLG RGHFGKVILS QHNPTSNYYA LKVLKKGDIL 841 GRDEVESLMV EKRIFEVSSR ARHPFLVNLN GCFQTNEHVF FCMEYSMGGD LMRHIHDDVF 901 DEVRGCFYAA CVVLGLDFLH KHNIIYRDIK LDNLLLDREG YVKIADFGLC KENMGPFDKT 961 STFCGTPEFL APEVLSDSSY TRAIDWWGLG VLIFEMLVGE PPFSGDDEEE IFDSIISEDV 1021 RYPRYLSVES IAIMRRLLRK VPEKRLGYGE RDAEDIKIQR FFRHISWEWD KLLNREIRPP 1081 FQPQIRNPED VSNFDLEFTQ EKARFSAASS TRPITEADQR LFNNFDFSIV P //