LOCUS CAM33501.1 835 aa PRT CON 06-FEB-2024 DEFINITION Caenorhabditis elegans Serine/threonine kinase SAD-1 protein. ACCESSION BX284606-3230 PROTEIN_ID CAM33501.1 SOURCE Caenorhabditis elegans ORGANISM Caenorhabditis elegans Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis. REFERENCE 1 (bases 1 to 17718942) AUTHORS WormBase. CONSRTM WormBase Consortium JOURNAL Submitted (04-FEB-2024) to the INSDC. WormBase Group, European Bioinformatics Institute, Cambridge, CB10 1SA, UK. Email: help@wormbase.org REFERENCE 2 (bases 1 to 17718942) AUTHORS Sulson J.E., Waterston R. JOURNAL Submitted (03-MAR-2003) to the INSDC. Nematode Sequencing Project: Sanger Institute, Hinxton, Cambridge CB10 1SA, UK and The Genome Institute at Washington University, St. Louis, MO 63110, USA. REFERENCE 3 (bases 1 to 17718942) AUTHORS Sulson J.E., Waterston R. CONSRTM Caenorhabditis elegans Sequencing Consortium TITLE Genome sequence of the nematode C. elegans: a platform for investigating biology JOURNAL Science 282(5396), 2012-2018(1998). COMMENT Annotated features correspond to WormBase release WS292. Protein-coding gene structures below are the result of integration and manual review of the following types of data: ab initio predictions by Genefinder (P. Green and L. Hillier, pers. comm.); alignments to published proteins and cDNAs; genome sequence conservation with other nematodes (e.g. to C. briggsae using WABA: Genome Res. 2000. 10:1115-1125); sequence features (such as trans-splice and polyA sites). Sources of data: large-scale EST projects of Yuji Kohara (http://www.ddbj.nig.ac.jp/c-elegans/html/CE_INDEX.html); ORFeome cloning project (http://worfdb.dfci.harvard.edu); RST large-scale sequencing project (Genome Res. 2009. 19:2334-2342); IST library (Science. 2004. 303:540-3); RT-PCR EST set (Ewing B. Green P. 2010 Unpublished); UTRome EST data submission (UTRome v1 Mangone M. Piano F. 2009); TEC-RED data (PNAS 2004. 101:1650-1655); RNA Deep sequencing data (454 read clusters - Makedonka Mitreva, unpublished; Illumina sequence data, Genome Res. 2009. 19:657-66); Numerous data sets from the modENCODE project (Science. 2010. 330:1775-87); Individual C. elegans Nucleotide Database submissions; Personal communications with C. elegans researchers; Non-Coding gene structures below are derived using the following methods and data: ab initio prediction of tRNAs by tRNAscan-SE (Nucl. Acids. Res., 25, 955-964); integration and appraisal of miRNAs from miRBase (http://www.mirbase.org); integration and appraisal of RFAM predictions (rfam.sanger.ac.uk); 21U-RNAs (Cell. 2006. 127:1193-1207); modENCODE data (Science. 2010. 330:1775-87); manual curation of novel published ncRNAs from the literature. FEATURES Qualifiers source /organism="Caenorhabditis elegans" /chromosome="X" /strain="Bristol N2" /mol_type="genomic DNA" /db_xref="taxon:6239" protein /transl_table=1 /gene="sad-1" /locus_tag="CELE_F15A2.6" /standard_name="F15A2.6b" /note="Partially confirmed by transcript evidence" /db_xref="EnsemblGenomes-Gn:WBGene00004719" /db_xref="EnsemblGenomes-Tr:F15A2.6a" /db_xref="WormBase:WBGene00004719" intron_pos 7:0 (1/14) intron_pos 59:1 (2/14) intron_pos 91:0 (3/14) intron_pos 119:2 (4/14) intron_pos 166:2 (5/14) intron_pos 217:0 (6/14) intron_pos 355:2 (7/14) intron_pos 475:2 (8/14) intron_pos 544:0 (9/14) intron_pos 631:2 (10/14) intron_pos 712:0 (11/14) intron_pos 762:2 (12/14) intron_pos 805:0 (13/14) intron_pos 832:1 (14/14) BEGIN 1 MFEALKEVLG EINSKLAAVN NELSSKIMSE NIVSTRPVAQ AQYCGPYKLE KTLGKGQTGL 61 VKTGTHCITG RKVAIKIVNK EKLSESVLQK VEREIAIMKL IEHPHVLHLY DVYENKKYLY 121 LLLEHVSGGE LFDYLVRKGR LMSKEARKFF RQIISALDFC HAHNICHRDL KPENLLLDER 181 NNIKVADFGM ASLQVEGSML ETSCGSPHYA CPEVIRGEKY DGRKADVWSC GVILYALLVG 241 ALPFDDDNLR NLLEKVKRGV FHIPHFVPAD VQSLLRAMIE VDPGKRYSLA DVFKHPWVSG 301 TTKADPELEL PMSQVVQTHV IPGEDSIDPD VLRHMNCLGC FKDKQKLINE LLSPKHNTEK 361 MVYFLLLDRK RRRPAQEDDT EIVLRGAAQN NDPPKKRTDS SRTSRYPMGS IADGSPINPR 421 KTYGRNQKSG RHSSLGGSPT ESPRSSTRDL FGSSSSGSYS ARAGEDRDRG RSASRSTNSY 481 HYYTQPVDPQ TLAEAARHVR DAQERRESRD SGRGSSRKES KDRSDKSASS SSCKNDASST 541 SSVPHKYSPP SVMSESVVVS SSTMNSTNSS TNSLIAGNSQ TSIGSTSGPW RSKLNNIKNS 601 FLGTPRFHRR KMSNGTAESD SEDSQMIDTT DLVKKSWFGS LASSMSVERD DTHCVPVQGK 661 TLNSIKAELI RAFLQIHELS HSVVGQNCFR VEYKRGPTVG GSVFSRGIKM NVDIIPSPQQ 721 VVIAGETPTY VVQFVLLAGP VRRFKRLVEH LSAILQNSTQ QRADRQQQAA LMVRPRRLSD 781 SSVGSACSDS ESNASSINMI ARHSDKTETT SATSSDPYGP SPSMRSVGSG TGITS //