LOCUS       CAH60759.2               885 aa    PRT              CON 06-FEB-2024
DEFINITION  Caenorhabditis elegans AT rich interactive domain 1A (
            SWI-like) protein.
ACCESSION   BX284606-2341
PROTEIN_ID  CAH60759.2
SOURCE      Caenorhabditis elegans
  ORGANISM  Caenorhabditis elegans
            Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida;
            Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae;
            Caenorhabditis.
REFERENCE   1  (bases 1 to 17718942)
  AUTHORS   WormBase.
  CONSRTM   WormBase Consortium
  JOURNAL   Submitted (04-FEB-2024) to the INSDC. WormBase Group, European
            Bioinformatics Institute, Cambridge, CB10 1SA, UK. Email:
            help@wormbase.org
REFERENCE   2  (bases 1 to 17718942)
  AUTHORS   Sulson J.E., Waterston R.
  JOURNAL   Submitted (03-MAR-2003) to the INSDC. Nematode Sequencing Project:
            Sanger Institute, Hinxton, Cambridge CB10 1SA, UK and The Genome
            Institute at Washington University, St. Louis, MO 63110, USA.
REFERENCE   3  (bases 1 to 17718942)
  AUTHORS   Sulson J.E., Waterston R.
  CONSRTM   Caenorhabditis elegans Sequencing Consortium
  TITLE     Genome sequence of the nematode C. elegans: a platform for
            investigating biology
  JOURNAL   Science 282(5396), 2012-2018(1998).
COMMENT     Annotated features correspond to WormBase release WS292.
            Protein-coding gene structures below are the result of integration
            and manual review of the following types of data: ab initio
            predictions by Genefinder (P. Green and L. Hillier, pers. comm.);
            alignments to published proteins and cDNAs; genome sequence
            conservation with other nematodes (e.g. to C. briggsae using WABA:
            Genome Res. 2000. 10:1115-1125); sequence features (such as
            trans-splice and polyA sites).
            Sources of data: large-scale EST projects of Yuji Kohara
            (http://www.ddbj.nig.ac.jp/c-elegans/html/CE_INDEX.html); ORFeome
            cloning project (http://worfdb.dfci.harvard.edu); RST large-scale
            sequencing project (Genome Res. 2009. 19:2334-2342); IST library
            (Science. 2004. 303:540-3); RT-PCR EST set (Ewing B. Green P. 2010
            Unpublished); UTRome EST data submission (UTRome v1 Mangone M.
            Piano F. 2009); TEC-RED data (PNAS 2004. 101:1650-1655); RNA Deep
            sequencing data (454 read clusters - Makedonka Mitreva,
            unpublished; Illumina sequence data, Genome Res. 2009. 19:657-66);
            Numerous data sets from the modENCODE project (Science. 2010.
            330:1775-87); Individual C. elegans Nucleotide Database
            submissions; Personal communications with C. elegans researchers;
            Non-Coding gene structures below are derived using the following
            methods and data: ab initio prediction of tRNAs by tRNAscan-SE
            (Nucl. Acids. Res., 25, 955-964); integration and appraisal of
            miRNAs from miRBase (http://www.mirbase.org); integration and
            appraisal of RFAM predictions (rfam.sanger.ac.uk); 21U-RNAs (Cell.
            2006. 127:1193-1207); modENCODE data (Science. 2010. 330:1775-87);
            manual curation of novel published ncRNAs from the literature.
FEATURES             Qualifiers
     source          /organism="Caenorhabditis elegans"
                     /chromosome="X"
                     /strain="Bristol N2"
                     /mol_type="genomic DNA"
                     /db_xref="taxon:6239"
     protein         /transl_table=1
                     /gene="nra-3"
                     /locus_tag="CELE_C17G1.4"
                     /standard_name="C17G1.4b"
                     /note="Confirmed by transcript evidence"
                     /db_xref="EnsemblGenomes-Gn:WBGene00007651"
                     /db_xref="EnsemblGenomes-Tr:C17G1.4b"
                     /db_xref="UniProtKB/TrEMBL:Q5WRN0"
                     /db_xref="WormBase:WBGene00007651"
     intron_pos      41:0 (1/7)
     intron_pos      98:2 (2/7)
     intron_pos      485:0 (3/7)
     intron_pos      632:0 (4/7)
     intron_pos      661:0 (5/7)
     intron_pos      732:1 (6/7)
     intron_pos      851:1 (7/7)
BEGIN
        1 MSTSFPNSNG NVPPYNQPTN GSFNQFGQGG YPGIDQFQHP NMYAPPANGY GGMPPGPPNI
       61 GGPQPPGGSQ QKGQQQQFPG SGANMKLPGY DGNSMQNAYM PYPPQNQRSG GQAPQNGPPP
      121 NYNSHQQMPP NNQYGGVPDP YRMYPGMQGP PGQVPNSQNS SSQQRPPSQN ANQQRPASQA
      181 GQQYPTQQAL PAHLHGTPTY PGMPPQNAPL QHYQPPQYAN GTPPVRGAGS SAFPPLQPSK
      241 QSKPDEHRPN NLSNSQYPGN FGAPGSSSGF DSFSNGSSGY QGYGLPGSGT PGSQGNTNNL
      301 GMNGATPGSY GFKSGPFGGP NQNLPGQSTS GHNTPGHSTS GQNTSAQNAT SGLTGPTGNP
      361 FGSMNGQGGN HGQFGGNDLS GVPGPSGGYG QMNSSNTPNQ SERSTPGQPS TPGTPGSHGT
      421 VGSNAPLSHQ KPSQQQQSMH NHLPHHQYNQ NNLLSPNHGA SSLGSQKQHG SSPMGSSLMP
      481 LNGQYPSMTQ NMQSPASTSM EPTFKEPAVP IRHSPSQMPT HLQSPVHPSP NGAPPAYNAP
      541 SSSKTPDPTQ QQRPHSPTFA VPTLPAAATL AQAFSANQIS TKPKTSPQKK KHEDGVPEPP
      601 TADTPFTTVT HYELPAAMTF LRDTLHVGPN DKVHPQVEKH YFSRKRQQLR VPYPEGINSH
      661 TTPPTEPNTF GFMQGNPYFD PKYNRMVPSQ TSHGPPLLSR SQSMHTPMIS PNFNASQPST
      721 SGRQPAKKAR SASDASEPPF NVPHPPSSRG SMDQRQLQQQ QIQMQQYHQH MQMQKMQQQQ
      781 MAAQQQMSRM GGSGPSSAGP GGSQLPSLSA PSLQRADSMP QLPSQQQPPM GGPMANHMGG
      841 MQPMNGTPTE GYYRPDGQQY WPQQQQRSWP PASEFEKPGP GWEPK
//