LOCUS       CAB03765.1               811 aa    PRT              CON 06-FEB-2024
DEFINITION  Caenorhabditis elegans RNA helicase protein.
ACCESSION   BX284603-825
PROTEIN_ID  CAB03765.1
SOURCE      Caenorhabditis elegans
  ORGANISM  Caenorhabditis elegans
            Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida;
            Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae;
            Caenorhabditis.
REFERENCE   1  (bases 1 to 13783801)
  AUTHORS   WormBase.
  CONSRTM   WormBase Consortium
  JOURNAL   Submitted (04-FEB-2024) to the INSDC. WormBase Group, European
            Bioinformatics Institute, Cambridge, CB10 1SA, UK. Email:
            help@wormbase.org
REFERENCE   2  (bases 1 to 13783801)
  AUTHORS   Sulson J.E., Waterston R.
  JOURNAL   Submitted (03-MAR-2003) to the INSDC. Nematode Sequencing Project:
            Sanger Institute, Hinxton, Cambridge CB10 1SA, UK and The Genome
            Institute at Washington University, St. Louis, MO 63110, USA.
REFERENCE   3  (bases 1 to 13783801)
  AUTHORS   Sulson J.E., Waterston R.
  CONSRTM   Caenorhabditis elegans Sequencing Consortium
  TITLE     Genome sequence of the nematode C. elegans: a platform for
            investigating biology
  JOURNAL   Science 282(5396), 2012-2018(1998).
COMMENT     Annotated features correspond to WormBase release WS292.
            Protein-coding gene structures below are the result of integration
            and manual review of the following types of data: ab initio
            predictions by Genefinder (P. Green and L. Hillier, pers. comm.);
            alignments to published proteins and cDNAs; genome sequence
            conservation with other nematodes (e.g. to C. briggsae using WABA:
            Genome Res. 2000. 10:1115-1125); sequence features (such as
            trans-splice and polyA sites).
            Sources of data: large-scale EST projects of Yuji Kohara
            (http://www.ddbj.nig.ac.jp/c-elegans/html/CE_INDEX.html); ORFeome
            cloning project (http://worfdb.dfci.harvard.edu); RST large-scale
            sequencing project (Genome Res. 2009. 19:2334-2342); IST library
            (Science. 2004. 303:540-3); RT-PCR EST set (Ewing B. Green P. 2010
            Unpublished); UTRome EST data submission (UTRome v1 Mangone M.
            Piano F. 2009); TEC-RED data (PNAS 2004. 101:1650-1655); RNA Deep
            sequencing data (454 read clusters - Makedonka Mitreva,
            unpublished; Illumina sequence data, Genome Res. 2009. 19:657-66);
            Numerous data sets from the modENCODE project (Science. 2010.
            330:1775-87); Individual C. elegans Nucleotide Database
            submissions; Personal communications with C. elegans researchers;
            Non-Coding gene structures below are derived using the following
            methods and data: ab initio prediction of tRNAs by tRNAscan-SE
            (Nucl. Acids. Res., 25, 955-964); integration and appraisal of
            miRNAs from miRBase (http://www.mirbase.org); integration and
            appraisal of RFAM predictions (rfam.sanger.ac.uk); 21U-RNAs (Cell.
            2006. 127:1193-1207); modENCODE data (Science. 2010. 330:1775-87);
            manual curation of novel published ncRNAs from the literature.
FEATURES             Qualifiers
     source          /organism="Caenorhabditis elegans"
                     /chromosome="III"
                     /strain="Bristol N2"
                     /mol_type="genomic DNA"
                     /db_xref="taxon:6239"
     protein         /transl_table=1
                     /gene="C46F11.4"
                     /locus_tag="CELE_C46F11.4"
                     /standard_name="C46F11.4"
                     /note="Confirmed by transcript evidence"
                     /db_xref="EnsemblGenomes-Gn:WBGene00008119"
                     /db_xref="EnsemblGenomes-Tr:C46F11.4"
                     /db_xref="GOA:Q93382"
                     /db_xref="InterPro:IPR000629"
                     /db_xref="InterPro:IPR001650"
                     /db_xref="InterPro:IPR011545"
                     /db_xref="InterPro:IPR014001"
                     /db_xref="InterPro:IPR014014"
                     /db_xref="InterPro:IPR027417"
                     /db_xref="UniProtKB/TrEMBL:Q93382"
                     /db_xref="WormBase:WBGene00008119"
     intron_pos      27:1 (1/12)
     intron_pos      70:0 (2/12)
     intron_pos      93:2 (3/12)
     intron_pos      177:2 (4/12)
     intron_pos      237:2 (5/12)
     intron_pos      295:0 (6/12)
     intron_pos      354:0 (7/12)
     intron_pos      398:0 (8/12)
     intron_pos      431:1 (9/12)
     intron_pos      511:1 (10/12)
     intron_pos      571:1 (11/12)
     intron_pos      716:2 (12/12)
BEGIN
        1 MWRGKYSGGY QNRFVSAKSS GTSSLSDGKS MNNVPPPAAL TVGNAPVPPP NRNILLSNRK
       61 EQEMKKEQEY ANLMAYGSTS EKQSRRKRIY DDEYLEGGSD DEKPASSSSK LAADDDDEED
      121 ELDAFMAGIE KQASSDKKVS EQKEKDRKEG KDTEDPSKKG LGRADIDEED MQESLFKFME
      181 EYKEKHENDD EQLEYDEDGN IIWSWKKVID PLPDIDHSQI QYQKFNKNFY EEHEDIKRLH
      241 YMDVIRLQNT MNLRVGGLKP PRPVCSFAHF SFDKLLMEAI RKSEYEQPTP IQAMAIPSAL
      301 SGRDVLGIAK TGSGKTAAYL WPAIVHIMDQ PDLKAGEGPV AVIVVPTREL AIQVFQEAKK
      361 FCKVYNINPI CAYGGGSKWE QSNELQNEGA EMVVCTPGRI IDLVKMGATN FLRTTFLVFD
      421 EADRMFDMGF EAQVKSISDH VRPDRQCLMF SATFKQKVER LARDALVDPV RIVQGEVGEA
      481 NADIEQKVFV MQNQDVKLHW LIRNLVEFAS LGKVLIFVTK KLDSEDVAKK LKMKDFDIVL
      541 LHGDMLQAER NENLLKFRKK SQILVATDVA ARGLDISEIR TVINFDMARD IDTHVHRIGR
      601 TGRAGHKGTA YTLVTEKDIE MVGHLVKNLE SVSQEVPKPL MDLAMKSSWF RGQRAGNGGP
      661 STGTQTRGRM GLGYTPKVRQ VGGGATGAQF DPLKEQKSCR GGGNQTVDGM IRNAQSFATS
      721 SSSSSSSSSG PASGANRAQM LKSAFQKSFQ TTFQRPTNES SNLPQQVASD PRPEWKKKVD
      781 ELNAKIAQQQ ASSASGGSSS SSSSSKRSRW E
//