LOCUS CAA58434.2 1227 aa PRT VRL 08-FEB-2018 DEFINITION Human betaherpesvirus 6A U7 protein. ACCESSION X83413-6 PROTEIN_ID CAA58434.2 SOURCE Human betaherpesvirus 6A ORGANISM Human betaherpesvirus 6A Viruses; Herpesvirales; Herpesviridae; Betaherpesvirinae; Roseolovirus. REFERENCE 1 (bases 1 to 159378) AUTHORS Gompels U.A., Nicholas J., Lawrence G., Jones M., Thomson B.J., Martin M.E., Efstathiou S., Craxton M., Macaulay H.A. TITLE The DNA sequence of human herpesvirus-6: structure, coding content, and genome evolution JOURNAL Virology 209(1), 29-51(1995). PUBMED 7747482 REFERENCE 2 AUTHORS Lawrence G.L., Chee M., Craxton M.A., Gompels U.A., Honess R.W., Barrell B.G. TITLE Human herpesvirus 6 is closely related to human cytomegalovirus JOURNAL J. Virol. 64(1), 287-299(1990). PUBMED 2152817 REFERENCE 3 AUTHORS Chang C.K., Balachandran N. TITLE Identification, characterization, and sequence analysis of a cDNA encoding a phosphoprotein of human herpesvirus 6 JOURNAL J. Virol. 65(6), 2884-2894(1991). PUBMED 1851860 REFERENCE 4 AUTHORS Teo I.A., Griffin B.E., Jones M.D. TITLE Characterization of the DNA polymerase gene of human herpesvirus 6 JOURNAL J. Virol. 65(9), 4670-4680(1991). PUBMED 1651403 REFERENCE 5 AUTHORS Thomson B.J., Efstathiou S., Honess R.W. TITLE Acquisition of the human adeno-associated virus type-2 rep gene by human herpesvirus type-6 JOURNAL Nature 351(6321), 78-80(1991). PUBMED 1851252 REFERENCE 6 AUTHORS Martin M.E.D., Nicholas J., Thomson B.J., Newman C., Honess R.W. TITLE Identification of a transactivating function mapping to the putative immediate-early locus of human herpesvirus 6 JOURNAL J. Virol. 65(10), 5381-5390(1991). PUBMED 1654446 REFERENCE 7 AUTHORS Efstathiou S., Lawrence G.L., Brown C.M., Barrell B.G. TITLE Identification of homologs to the human cytomegalovirus US22 gene family in human helpesvirus-6 JOURNAL J. Gen. Virol. 73, 1661-1671(1992). PUBMED 1321206 REFERENCE 8 AUTHORS Geng Y., Chandran B., Josephs S.F., Wood C. TITLE Identification and characterization of a human herpesvirus 6 gene segment that trans activates the human immunodeficiency virus type 1 promoter JOURNAL J. Virol. 66(3), 1564-1570(1992). PUBMED 1310766 REFERENCE 9 AUTHORS Gompels U.A., Carss A.L., Sun N., Arrand J.R. TITLE Infectivity determinants encoded in a conserved gene block of human herpesvirus-6 JOURNAL DNA Seq 3(1), 25-39(1992). PUBMED 1333836 REFERENCE 10 AUTHORS Neipel F., Ellinger K., Fleckenstein B. TITLE Gene for the major antigenic structural protein (p100) of human herpesvirus 6 JOURNAL J. Virol. 66(6), 3918-3924(1992). PUBMED 1374813 REFERENCE 11 AUTHORS Thomson B.J., Honess R.W. TITLE The right end of the unique region of the genome of human herpesvirus 6 U1102 contains a candidate immediate early gene enhancer and a homologue of the human cytomegalovirus US22 gene family JOURNAL J. Gen. Virol. 73, 1649-1660(1992). PUBMED 1321205 REFERENCE 12 AUTHORS Ellinger K., Neipel F., Foa-Tomasi L., Campadelli-Fiume G., Fleckenstein B. TITLE The glycoprotein B homologue of human herpesvirus 6 JOURNAL J. Gen. Virol. 74, 495-500(1993). PUBMED 8383182 REFERENCE 13 AUTHORS Gompels U.A., Carrigan D.R., Carss A.L., Arno J. TITLE Two groups of human herpesvirus 6 identified by sequence analyses of laboratory strains and variants from Hodgkin's lymphoma and bone marrow transplant patients JOURNAL J. Gen. Virol. 74, 613-622(1993). PUBMED 8385692 REFERENCE 14 AUTHORS Liu D.X., Gompels U.A., Nicholas J., Lelliott C. TITLE Identification and expression of the human herpesvirus 6 glycoprotein H and interaction with an accessory 40K glycoprotein JOURNAL J. Gen. Virol. 74, 1847-1857(1993). PUBMED 8397282 REFERENCE 15 AUTHORS Liu D.X., Gompels U.A., Foa-Tomasi L., Campadelli-Fiume G. TITLE Human herpesvirus-6 glycoprotein H and L homologs are components of the gp100 complex and the gH external domain is the target for neutralizing monoclonal antibodies JOURNAL Virology 197(1), 12-22(1993). PUBMED 7692666 REFERENCE 16 AUTHORS Pellett P.E., Sanchez-Martinez D., Dominguez G., Black J.B., Anton E., Greenamoyer C., Dambaugh T.R. TITLE A strongly immunoreactive virion protein of human herpesvirus 6 variant B strain Z29: identification and characterization of the gene and mapping of a variant-specific monoclonal antibody reactive epitope JOURNAL Virology 195(2), 521-531(1993). PUBMED 7687803 REFERENCE 17 AUTHORS Pfeiffer B., Berneman Z.N., Neipel F., Chang C.K., Tirwatnapong S., Chandran B. TITLE Identification and mapping of the gene encoding the glycoprotein complex gp82-gp105 of human herpesvirus 6 and mapping of the neutralizing epitope recognized by monoclonal antibodies JOURNAL J. Virol. 67(8), 4611-4620(1993). PUBMED 7687301 REFERENCE 18 AUTHORS Gompels U.A., Macaulay H.A. TITLE Characterisation of human telomeric repeat sequences from human herpesvirus-6 and relationship to replication JOURNAL J. Gen. Virol. 76, 451-458(1995). PUBMED 7844567 REFERENCE 19 AUTHORS Dewhurst S., Dollard S.C., Pellett P.E., Dambaugh T.R. TITLE Identification of a lytic-phase origin of DNA replication in human herpesvirus 6B strain Z29 JOURNAL J. Virol. 67(12), 7680-7683(1993). PUBMED 8230490 REFERENCE 20 AUTHORS Nicholas J. TITLE Nucleotide sequence of a 21-kilobase-pair region of the genome of human herpesvirus-6 containing homologues of human cytomegalovirus major immediate-early and replication genes JOURNAL Unpublished. REFERENCE 21 AUTHORS Nicholas J., Martin M. TITLE Nucleotide sequence analysis of a 38.5-kilobase-pair region of the genome of human herpesvirus 6 encoding human cytomegalovirus immediate-early gene homologs and transactivating functions JOURNAL J. Virol. 68(2), 597-610(1994). PUBMED 8289364 REFERENCE 22 AUTHORS Schiewe U., Neipel F., Schreiner D., Fleckenstein B. TITLE Structure and transcription of an immediate-early region in the human herpesvirus 6 genome JOURNAL J. Virol. 68(5), 2978-2985(1994). PUBMED 8151768 REFERENCE 23 AUTHORS Thompson J., Choudhury S., Kashanchi F., Doniger J., Berneman Z., Frenkel N., Rosenthal L.J. TITLE A transforming fragment within the direct repeat region of human herpesvirus type 6 that transactivates HIV-1 JOURNAL Oncogene 9(4), 1167-1175(1994). PUBMED 8134119 REFERENCE 24 AUTHORS Zhou Y., Chang C.K., Qian G., Chandran B., Wood C. TITLE trans-activation of the HIV promoter by a cDNA and its genomic clones of human herpesvirus-6 JOURNAL Virology 199(2), 311-322(1994). PUBMED 8122364 REFERENCE 25 AUTHORS Thomson B.J., Dewhurst S., Gray D. TITLE Structure and heterogeneity of the a sequences of human herpesvirus 6 strain variants U1102 and Z29 and identification of human telomeric repeat sequences at the genomic termini JOURNAL J. Virol. 68(5), 3007-3014(1994). PUBMED 8151770 REFERENCE 26 AUTHORS Thomson B.J., Weindler F.W., Gray D., Schwaab V., Helbronn R. TITLE Human herpesvirus 6 (HHV-6) is a helper virus for adeno-associated virus type 2 (AAV-2) and the AAV-2 rep gene homologue in HHV-6 can mediate AAV-2 DNA replication and regulate gene expression JOURNAL Virology 204(1), 304-311(1994). PUBMED 8091661 REFERENCE 27 AUTHORS Inoue N., Dambaugh T.R., Rapp J.C., Pellett P.E. TITLE Alphaherpesvirus origin-binding protein homolog encoded by human herpesvirus 6B, a betaherpesvirus, binds to nucleotide sequences that are similar to ori regions of alphaherpesviruses JOURNAL J. Virol. 68(7), 4126-4136(1994). PUBMED 8207791 REFERENCE 28 AUTHORS Lawrence G.L., Nicholas J., Barrell B.G. TITLE Human herpesvirus 6 (strain U1102) encodes homologues of the conserved herpesvirus glycoprotein gM and the alphaherpesvirus origin-binding protein JOURNAL J. Gen. Virol. 0, 0(1994). REFERENCE 29 AUTHORS Qian G., Wood C., Chandran B. TITLE Identification and characterization of glycoprotein gH of human herpesvirus-6 JOURNAL J. Virol. 194, 380-386(1993). REFERENCE 30 AUTHORS Jones M., Teo I. TITLE Identification and analysis of the transport/capsid assembly protein (tp/cap) gene of human herpesvirus-6 (HHV6) JOURNAL Virology 197(1), 449-454(1993). PUBMED 8212582 REFERENCE 31 AUTHORS Littler E., Lawrence G., Liu M.Y., Barrell B.G., Arrand J.R. TITLE Identification, cloning, and expression of the major capsid protein gene of human herpesvirus 6 JOURNAL J. Virol. 64(2), 714-722(1990). PUBMED 2153237 REFERENCE 32 AUTHORS Martin M., Thomson B.J., Honess R.W., Craxton M.A., Gompels U.A., Liu M.Y., Littler E., Arrand J.R., Teo I., Jones M.D. TITLE The genome of human herpesvirus 6: Maps of unit-length and concatemeric genomes for nine restriction endonucleases JOURNAL J. Gen. Virol. 72, 157-168(1991). PUBMED 1846644 REFERENCE 33 AUTHORS Chee M.S., Lawrence G.L., Barrell B.G. TITLE Alpha-, beta- and gammaherpesviruses encode a putative phosphotransferase JOURNAL J. Gen. Virol. 70, 1151-1160(1989). PUBMED 2543772 REFERENCE 34 AUTHORS Gompels U.A. JOURNAL Submitted (13-DEC-1994) to the INSDC. U.A. Gompels, Viral Pathogenesis Unit, Department of Clinical Sciences, London School of Hygiene and Tropical Medicine, University of London, Keppel Street, London WC1E 7HT, UK REMARK (1-159321) REFERENCE 35 AUTHORS Tweedy J.G., Escriva E., Topf M., Gompels U.A. TITLE Analyses of Tissue Culture Adaptation of Human Herpesvirus-6A by Whole Genome Deep Sequencing Redefines the Reference Sequence and Identifies Virus Entry Complex Changes JOURNAL Viruses 10(1), E16-E16(2017). PUBMED 29301233 FEATURES Qualifiers source /organism="Human betaherpesvirus 6A" /host="Homo sapiens" /isolate="U1102" /mol_type="genomic DNA" /country="Uganda" /db_xref="taxon:32603" protein /gene="U7" /note="SSL2; similar to HHV-5 UL28, HHV-5 US22 gene family; US22 family; exon 3 is related to U4; US22 like; Region: US22; pfam02393" /db_xref="UniProtKB/Swiss-Prot:Q01353" intron_pos 355:1 (1/2) intron_pos 680:2 (2/2) BEGIN 1 MDLEAKEISG NIPNENALAE LCRLCESADL SQIENFVGRY KNWCLSIIWP RNCWLRFTPR 61 KDVAGYTEKM FEDMDDHYQG FVEKLCLLGT IQIPYRDVPI LIGRSKRIFL HDLETDTLHF 121 VCDNFEQFVR YGVLGTNIIT CAEPVYRHGL YEGPRFESLE NLMNNDVLRS PYTLNVHVKL 181 NRKGVLGIKA MRKHYIAMLR EFDELARCAS LDDVGRFVSL NVGRDLRLDM PVFKSLTLGT 241 RDSVWTGTCR LANLKEQEDL VEKVVVLGYL NDHDYESKCT RPILCIGKSG KIYYYDWIDN 301 VLVKLGDCLL TFLRVGFARL FADYGYEKIG KISMRFGRMS TLGMSETYQS CMSLKIVPVC 361 NDEFALSSCV PTLDFDVDVL SAAYGDGLEI SSPGLRCCIA WPPMYALTLG EFYHFHTHRW 421 VSAYDWSSLL DADEFMSAVG YAHPIYRDPN PDYDPYVMHT STGKTIAVDT VTEKVYIIAE 481 SLVQFFNIGL RQFPPFAEAE LDPEQEKMWF GETKCGREEF ILLQRNLPAM KDYVAKHSGK 541 RIRVDAFQDF DFSFCSLSDI YYLTGPGILE KITEKDYAII GTCARSQAEP NCRAAIVMGS 601 NCHIYIYVEN KISKVSKSLR TFIRRGFDEL LYKEKYSLDW SDDTLFYISD TETENLNRML 661 NGELPVLRSK PRHMCVRKDR LVKDRSKILF AVRLDEEDSP TVKFITKFLT PVFVGRLPAT 721 NRFVVPVSRA RLTNGLQGTA AARFGIKGLH PSSDCLVWNI LVDYEYETYK YPSTYIRADQ 781 IADMVKDLKF MDNFNEKWQC ITKLAFLGLY AGASLFNFTS KPTLGYWCRY LSEYASMLLF 841 QFESKLKELT KESTRQLGGY NLCHWGQELK DCLENKSDVF FRYDFFERIE SCLIEHFMLL 901 CGCVECRRMF IMYNKRGRKF DFGHSVRIQC FPMIGSIRLP AFLHLGEPYD VSLSSLIAKD 961 LGLSMIEGQI ELSRLPISLQ ISVTPDKKAL LTFLTNIVFI VFVVNTLYRV INAELDIYYD 1021 LFTEEVGKLC VAMEEEMKLG RNGCLGDLCY FSPMKQMKEI VRCPGEKSQF ILKCWEALRI 1081 GFSVPAYKDY DETPFMEMFF MHHLHIKRFH EDNDRDLVSC DNLIPGFFIV NTDGENFLQR 1141 LQRVVLPVVE DYLTNTRCIN GTMAFFFSGL KYFGSGNHRG FQISPEKDVR AIAYKLGSLD 1201 VLRDDYKYYE YTPPDCPGEL NGHGGDE //