LOCUS       BCM24842.1              1149 aa    PRT              BCT 26-AUG-2021
DEFINITION  Methyloradius palustris transcription-repair-coupling
            factor protein.
ACCESSION   AP024110-1101
PROTEIN_ID  BCM24842.1
SOURCE      Methyloradius palustris
  ORGANISM  Methyloradius palustris
            Bacteria; Pseudomonadota; Betaproteobacteria; Nitrosomonadales;
            Methylophilaceae; Methyloradius.
REFERENCE   1  (bases 1 to 2800413)
  AUTHORS   Miyadera,T. and Kojima,H.
  TITLE     Direct Submission
  JOURNAL   Submitted (19-OCT-2020) to the DDBJ/EMBL/GenBank databases.
            Contact:Hisaya Kojima
            Hokkaido University, Institute of Low Temperature Science,
            Microbial Ecology Group; nishi-8, kita-19, Sapporo, Hokkaido
            060-0819, Japan
            URL    :http://www.lowtem.hokudai.ac.jp/en/index.html
REFERENCE   2  
  AUTHORS   Miyadera,T., Kojima,H. and Fukui,M.
  TITLE     Methyloradius palustris gen. nov., sp. nov., a methanol-oxidizing
            bacterium isolated from snow
  JOURNAL   Arch. Microbiol. (2021) In press
  REMARK    Publication Status: Available-Online prior to print
            DOI:10.21203/rs.3.rs-687530/v1
COMMENT     Annotated at DFAST https://dfast.nig.ac.jp/
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: Unicycler v. 0.4.7
            Genome Coverage       :: 635x
            Sequencing Technology :: Oxford Nanopore GridION; MGI DNBSEQ-G400
            ##Genome-Assembly-Data-END##
FEATURES             Qualifiers
     source          /collection_date="2019"
                     /country="Japan:Gunma, Ozegahara moor"
                     /db_xref="taxon:2778876"
                     /isolation_source="reddish brown snow from a moor"
                     /lat_lon="36.9175 N 139.1988 E"
                     /mol_type="genomic DNA"
                     /organism="Methyloradius palustris"
                     /strain="Zm11"
                     /type_material="type strain of Methyloradius palustris"
     protein         /gene="mfd"
                     /inference="COORDINATES:ab initio
                     prediction:MetaGeneAnnotator"
                     /inference="similar to AA sequence:UniProtKB:A0A0H2WEK2"
                     /locus_tag="ZMTM_11010"
                     /transl_table=11
BEGIN
        1 MPHPAPGQSE RVAPMPAGYD SLLLAQHAQS LKKHQAETKS NKSSKLKPLV IITASAFDAQ
       61 RLVEELPFFA PDLVVSMLPD WETLPYDHFS PHPDLISERL ATLYQISQNL CDVIIVPAGT
      121 ALLRLPSQAY LAANTFMLKK GQRLDLDALR KQCAEAGYHH VSQVMSPGEF SVRGGLVDLF
      181 PMGSALPYRL DLFDDEIETI RTFDIDTQRS LYPVAEIRLL PAREFPLDEA GIARFRQNFR
      241 ETFEGDPSRS RIYKDVSKGI ASGGIEWYLP LFFEQTATLL DYLPENATLC MHGNLDLAAQ
      301 GFWREAQSRY RLLAHDVERP ILKPETLLIK ADDFFTLTHQ YARLIITTES TENGLPALDI
      361 ERRAEQPLHK LQSFIKQFPG RILIAAESLG RRETMLQLLH DQGITPTLCE TWDAFFNSDE
      421 KLILGVSPLH AGFIHPHSPD HNQQSFAIIT EAELYAATVR QQRRREKEKA RNTEGMLKDL
      481 SELRENDPVV HEQHGVGRYR GLVNLDFGEG ETEFLLLEYA GDDKLYVPVS QLFLISRYSG
      541 GPPESAPLHR LGSGNWEKAK KKALKQIRDT AAELLNLYAQ RAARRGHAFK LSLHDYETFA
      601 EGFPFEETPD QLSAIEAVIS DMQSGRPMDR LVCGDVGFGK TEVALRAAFV AVMGGRQVSV
      661 LVPTTLLAEQ HFQNFSDRFA EWPIKIAEIS RFRSAKEQTE ALKGLADGKI DIIIGTHRLI
      721 QKDVHFKNLG LVILDEEHRF GVRQKEQLKA MRAEVDVLTL TATPIPRTLS MAMEGLREFS
      781 VITTPPQKRL AIKTFHTDYS EGIIHEAVMR EFKRGGQVYF LHNEVDTIHS MREKLERIVP
      841 EARIAIAHGQ LRERELEHVM RDFYQQRFNL LLCTTIIETG IDVPTANTII MNRADMFGLA
      901 QLHQLRGRVG RSHHQAYAYL LTDPNRNITP QAKKRLDAIQ LLEDLGAGFH LAMHDLEIRG
      961 AGELLGDSQS GEMQEIGFHL YSEMLAHAVK QLKAGKEPDI SAPLGITTEI NLHTPALLTN
     1021 DYCPDVHERL VLYKRLANCT NDDELDNMQE ELIDRFGLLP EQGEALMACH RLRVSAKPLG
     1081 ITKIDASDSA IQLQFSQQTE LDPTKLIALL QRDRRCRMNG PDKLRVTLQL ADINDRASFI
     1141 KGLLKELAS
//