LOCUS       BCM24012.1              1390 aa    PRT              BCT 26-AUG-2021
DEFINITION  Methyloradius palustris DNA-directed RNA polymerase subunit
            beta protein.
ACCESSION   AP024110-271
PROTEIN_ID  BCM24012.1
SOURCE      Methyloradius palustris
  ORGANISM  Methyloradius palustris
            Bacteria; Pseudomonadota; Betaproteobacteria; Nitrosomonadales;
            Methylophilaceae; Methyloradius.
REFERENCE   1  (bases 1 to 2800413)
  AUTHORS   Miyadera,T. and Kojima,H.
  TITLE     Direct Submission
  JOURNAL   Submitted (19-OCT-2020) to the DDBJ/EMBL/GenBank databases.
            Contact:Hisaya Kojima
            Hokkaido University, Institute of Low Temperature Science,
            Microbial Ecology Group; nishi-8, kita-19, Sapporo, Hokkaido
            060-0819, Japan
            URL    :http://www.lowtem.hokudai.ac.jp/en/index.html
REFERENCE   2  
  AUTHORS   Miyadera,T., Kojima,H. and Fukui,M.
  TITLE     Methyloradius palustris gen. nov., sp. nov., a methanol-oxidizing
            bacterium isolated from snow
  JOURNAL   Arch. Microbiol. (2021) In press
  REMARK    Publication Status: Available-Online prior to print
            DOI:10.21203/rs.3.rs-687530/v1
COMMENT     Annotated at DFAST https://dfast.nig.ac.jp/
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: Unicycler v. 0.4.7
            Genome Coverage       :: 635x
            Sequencing Technology :: Oxford Nanopore GridION; MGI DNBSEQ-G400
            ##Genome-Assembly-Data-END##
FEATURES             Qualifiers
     source          /collection_date="2019"
                     /country="Japan:Gunma, Ozegahara moor"
                     /db_xref="taxon:2778876"
                     /isolation_source="reddish brown snow from a moor"
                     /lat_lon="36.9175 N 139.1988 E"
                     /mol_type="genomic DNA"
                     /organism="Methyloradius palustris"
                     /strain="Zm11"
                     /type_material="type strain of Methyloradius palustris"
     protein         /gene="rpoB"
                     /inference="COORDINATES:ab initio
                     prediction:MetaGeneAnnotator"
                     /inference="similar to AA sequence:UniProtKB:Q63Q03"
                     /locus_tag="ZMTM_02710"
                     /transl_table=11
BEGIN
        1 MSYSFTEKKR IRKSFAKRES VQEVPYLLAM QLESYAAFLQ ANVSVDKREN AGLQATFASV
       61 FPIVSHSGNA RLDYVSYHLG QEPFDVKECQ QRGLTYAAPL RVKVRLTIMD KEASKPTVKE
      121 VKEQEVYMGE LPLMTENGSF VINGTERVIV SQLHRSPGVF FEHDRGKTHS SGKLLFSARI
      181 IPYRGSWLDF EFDPKDYLYF RVDRRRKMPV TILLKALGYT PEQILETFYD LDTFHISAKG
      241 IQFELVPERL RGEVAKFDIV SKDGTVVVAK DKRITVKHIR DMEKAGISKI TVPEEFLLGR
      301 ALSTAIVDKE TGEVVANAND EITESVVEKL REASVSKINT LYANDLDHGD YISQTLRIDE
      361 IPDQYSAKVA IYRMMRPGEP PTEDAVNALF EGLFFNEDRY DLSVVGRMKF NRRAFPERIE
      421 DRTAAWLRRF YEKSGARGAE GSGILSNQDI LAVVAVLLEL RNGRGEIDDI DHLGNRRIRS
      481 VGELAENQFR AGLVRVERAV KERLSQAESD NLMPHDLINA KPVSSAIREF FGSSQLSQFM
      541 DQTNPLSEIT HKRRVSALGP GGLTRERAGF EVRDVHTTHY GRVCPIETPE GPNIGLINSL
      601 ALFSRTNKYG FLETPYRRVE NNKVSEKIDF LSAIEESQYM IAQANTELDS KGQFQEELVS
      661 ARYHNEFTMA QPDRVQYMDV APSQIVSVAA SLIPFLEHDD ANRALMGANM QRQAVPCLRA
      721 EKAVVGTGIE RTVAIDSGTI VQARRGGIVD YVDSSRIVIR VHDAEALAGE VGVDIYNLTK
      781 YTRSNQNTNI NQRPLVNVGD VLARGDVIAD GASTDMGELA LGQNMLVAFM PWNGYNFEDS
      841 ILISERVVSD DRYTSIHIEE LSVVARDTKL GAEEITRDIS NLSERMLGRL DDSGIIYIGA
      901 EVEAGDVLVG KVTPKGETQL TPEEKLLRAI FGEKASDVKD TSLRVPSGMS GTVIDVQVFT
      961 REGIDRDPRA QQIIDDQLGH YKQDLADQMR IVEDDAFGRI RRLLEGKVAT GGPKKLKKGD
     1021 TLNAEYLEDI GRYDWFDIRL SDEDAARQLE QLKDSLAQAR VTFDSKFEEK KRKLTQGDEL
     1081 PPGVQKMVKV YLAVKRRIQP GDKMAGRHGN KGVVSKIVPV EDMPHMADGT PMDIVLNPLG
     1141 VPSRMNIGQI LETHLGWAAK GLGMRIGEML RSQTKVSEVR KFIDQIYNNS TGKKEDIKSL
     1201 TDTEVLDLAK NLERGVPFAT PVFDGAAESD IKAMLDLAFP DDDPRTKQLE FAAGKTQVKL
     1261 IDGRTGETFE RPVTVGYMHV LKLHHLVDDK MHARSTGPYS LVTQQPLGGK AQFGGQRFGE
     1321 MEVWALEAYG AAYTLQEMLT VKSDDVSGRT KVYENIVKGE HKIDAGMPES FNVLVKEIRS
     1381 LAIDIDLDRN
//