LOCUS       BCM23915.1               480 aa    PRT              BCT 26-AUG-2021
DEFINITION  Methyloradius palustris RNA polymerase sigma-54 factor protein.
ACCESSION   AP024110-174
PROTEIN_ID  BCM23915.1
SOURCE      Methyloradius palustris
  ORGANISM  Methyloradius palustris
            Bacteria; Pseudomonadota; Betaproteobacteria; Nitrosomonadales;
            Methylophilaceae; Methyloradius.
REFERENCE   1  (bases 1 to 2800413)
  AUTHORS   Miyadera,T. and Kojima,H.
  TITLE     Direct Submission
  JOURNAL   Submitted (19-OCT-2020) to the DDBJ/EMBL/GenBank databases.
            Contact:Hisaya Kojima
            Hokkaido University, Institute of Low Temperature Science,
            Microbial Ecology Group; nishi-8, kita-19, Sapporo, Hokkaido
            060-0819, Japan
            URL    :http://www.lowtem.hokudai.ac.jp/en/index.html
REFERENCE   2  
  AUTHORS   Miyadera,T., Kojima,H. and Fukui,M.
  TITLE     Methyloradius palustris gen. nov., sp. nov., a methanol-oxidizing
            bacterium isolated from snow
  JOURNAL   Arch. Microbiol. (2021) In press
  REMARK    Publication Status: Available-Online prior to print
            DOI:10.21203/rs.3.rs-687530/v1
COMMENT     Annotated at DFAST https://dfast.nig.ac.jp/
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: Unicycler v. 0.4.7
            Genome Coverage       :: 635x
            Sequencing Technology :: Oxford Nanopore GridION; MGI DNBSEQ-G400
            ##Genome-Assembly-Data-END##
FEATURES             Qualifiers
     source          /collection_date="2019"
                     /country="Japan:Gunma, Ozegahara moor"
                     /db_xref="taxon:2778876"
                     /isolation_source="reddish brown snow from a moor"
                     /lat_lon="36.9175 N 139.1988 E"
                     /mol_type="genomic DNA"
                     /organism="Methyloradius palustris"
                     /strain="Zm11"
                     /type_material="type strain of Methyloradius palustris"
     protein         /gene="rpoN_2"
                     /inference="COORDINATES:ab initio
                     prediction:MetaGeneAnnotator"
                     /inference="similar to AA sequence:UniProtKB:Q63XK7"
                     /locus_tag="ZMTM_01740"
                     /transl_table=11
BEGIN
        1 MKQSLQLKFS QHLALTPQLQ QSIRLLQLST QELNQELETL LQENPLLERT TNTDQPVDLE
       61 AEAFVPNNTV QETSIPATDE PARQEEYGDD YFEFSSGNRW EDNSAGNDDE NDFSFQESVS
      121 LTLREHLISQ LKLMQFSERD QTLAMLLVDT INDDGYLEQP LEELLELLPD ELEIDLLELQ
      181 TALKHIQHLD PPGVGARSLA ECLALQLQAM PEDTPHLGLA INVALQHLPI LASRDYAKLR
      241 KTLQCDDDVL RAVQLMVTQL NPRPGSDFTK IGSDHYIQHE ILVKKVKGLW IATLNDEVVP
      301 RLRINQLYAG ILKRNRDSSS QYLMSQMQEA KWMIKNIQQR FSTILRVSQA IVDRQRNFFE
      361 HGEVAMRPLV LREIADELGL HESTVSRVTT RKYMLTPRGV YELKYFFGSH VSTESGGACS
      421 ATAIRALIKQ MVSEENAKKP LSDNQITDIL SKQGIMVARR TIAKYRESLS IPAANQRKSI
//