LOCUS       BCA71202.1              1407 aa    PRT              BCT 06-NOV-2020
DEFINITION  Escherichia coli RNA polymerase beta prime subunit protein.
ACCESSION   AP022811-4526
PROTEIN_ID  BCA71202.1
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5283470)
  AUTHORS   Kimata,K., Lee,K., Watahiki,M., Isobe,J., Ohnishi,M. and Iyoda,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (21-FEB-2020) to the DDBJ/EMBL/GenBank databases.
            Contact:Ken-ichi Lee
            National Institute of Infectious Diseases, Deaprtment of
            Bacteriology I; 1-23-1,Toyama, Shinjuku, Tokyo 162-8640, Japan
REFERENCE   2  
  AUTHORS   Kimata,K., Lee,K., Watahiki,M., Isobe,J., Ohnishi,M. and Iyoda,S.
  TITLE     Global distribution of epidemic-related Shiga toxin 2 encoding
            phages among enteroaggregative Escherichia coli
  JOURNAL   Sci. Rep. 10, 11738 (2020)
  REMARK    Publication Status: Online-Only
            DOI:10.1038/s41598-020-68462-9
COMMENT     ##Genome-Assembly-Data-START##
            Assembly Method       :: Unicycler v. 0.4.7
            Genome Coverage       :: 117.0X
            Sequencing Technology :: Illumina MiSeq, PacBio RSII
            ##Genome-Assembly-Data-END##
FEATURES             Qualifiers
     source          /collection_date="1999"
                     /db_xref="taxon:562"
                     /host="Homo sapiens"
                     /mol_type="genomic DNA"
                     /organism="Escherichia coli"
                     /strain="JE86-ST02"
     protein         /EC_number="2.7.7.6"
                     /gene="rpoC"
                     /inference="COORDINATES:ab initio
                     prediction:MetaGeneAnnotator"
                     /inference="similar to AA sequence:INSD:AAC76962.1"
                     /locus_tag="JE86ST02C_45250"
                     /note="DFAST-ECOLI:AAC76962.1 RNA polymerase beta prime
                     subunit [pid:96.7%, q_cov:100.0%, s_cov:100.0%,
                     Eval:0.0e+00]"
                     /note="MGA_4536"
                     /transl_table=11
BEGIN
        1 MKDLLKFLKA QTKTEEFDAI KIALASPDMI RSWSFGEVKK PETINYRTFK PERDGLFCAR
       61 IFGPVKDYEC LCGKYKRLKH RGVICEKCGV EVTQTKVRRE RMGHIELASP TAHIWFLKSL
      121 PSRIGLLLDM PLRDIERVLY FESYVVIEGG MTNLERQQIL TEEQYLDALE EFGDEFDAKM
      181 GAEAIQALLK SMDLEQECEQ LREELNETNS ETKRKKLTKR IKLLEAFVQS GNKPEWMILT
      241 VLPVLPPDLR PLVPLDGGRF ATSDLNDLYR RVINRNNRLK RLLDLAAPDI IVRNEKRMLQ
      301 EAVDALLDNG RRGRAITGSN KRPLKSLADM IKGKQGRFRQ NLLGKRVDYS GRSVITVGPY
      361 LRLHQCGLPK KMALELFKPF IYGKLELRGL ATTIKAAKKM VEREEAVVWD ILDEVIREHP
      421 VLLNRAPTLH RLGIQAFEPV LIEGKAIQLH PLVCAAYNAD FDGDQMAVHV PLTLEAQLEA
      481 RALMMSTNNI LSPANGEPII VPSQDVVLGL YYMTRDCVNA KGEGMVLTGP KEAERLYRSG
      541 LASLHARVKV RITEYEKDAN GELVAKTSLK DTTVGRAILW MIVPKGLPYS IVNQALGKKA
      601 ISKMLNTCYR ILGLKPTVIF ADQIMYTGFA YAARSGASVG IDDMVIPEKK HEIISEAEAE
      661 VAEIQEQFQS GLVTAGERYN KVIDIWAAAN DRVSKAMMDN LQTETVINRD GQEEKQVSFN
      721 SIYMMADSGA RGSAAQIRQL AGMRGLMAKP DGSIIETPIT ANFREGLNVL QYFISTHGAR
      781 KGLADTALKT ANSGYLTRRL VDVAQDLVVT EDDCGTHEGI MMTPVIEGGD VKEPLRDRVL
      841 GRVTAEDVLK PGTADILVPR NTLLHEQWCD LLEENSVDAV KVRSVVSCDT DFGVCAHCYG
      901 RDLARGHIIN KGEAIGVIAA QSIGEPGTQL TMRTFHIGGA ASRAAAESSI QVKNKGSIKL
      961 SNVKSVVNSS GKLVITSRNT ELKLIDEFGR TKESYKVPYG AVLAKGDGEQ VAGGETVANW
     1021 DPHTMPVITE VSGFVRFTDM IDGQTITRQT DELTGLSSLV VLDSAERTAG GKDLRPALKI
     1081 VDAQGNDVLI PGTDMPAQYF LPGKAIVQLE DGVQISSGDT LARIPQESGG TKDITGGLPR
     1141 VADLFEARRP KEPAILAEIS GIVSFGKETK GKRRLVITPV DGSDPYEEMI PKWRQLNVFE
     1201 GERVERGDVI SDGPEAPHDI LRLRGVHAVT RYIVNEVQDV YRLQGVKIND KHIEVIVRQM
     1261 LRKATIVNAG SSDFLEGEQV EYSRVKIANR ELEANGKVGA TYSRDLLGIT KASLATESFI
     1321 SAASFQETTR VLTEAAVAGK RDELRGLKEN VIVGRLIPAG TGYAYHQDRM RRRAAGEAPA
     1381 APQVTAEDAS ASLAELLNAG LGGSDNE
//