LOCUS       BCA70403.1               646 aa    PRT              BCT 06-NOV-2020
DEFINITION  Escherichia coli regulatory protein CsrD protein.
ACCESSION   AP022811-3727
PROTEIN_ID  BCA70403.1
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5283470)
  AUTHORS   Kimata,K., Lee,K., Watahiki,M., Isobe,J., Ohnishi,M. and Iyoda,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (21-FEB-2020) to the DDBJ/EMBL/GenBank databases.
            Contact:Ken-ichi Lee
            National Institute of Infectious Diseases, Deaprtment of
            Bacteriology I; 1-23-1,Toyama, Shinjuku, Tokyo 162-8640, Japan
REFERENCE   2  
  AUTHORS   Kimata,K., Lee,K., Watahiki,M., Isobe,J., Ohnishi,M. and Iyoda,S.
  TITLE     Global distribution of epidemic-related Shiga toxin 2 encoding
            phages among enteroaggregative Escherichia coli
  JOURNAL   Sci. Rep. 10, 11738 (2020)
  REMARK    Publication Status: Online-Only
            DOI:10.1038/s41598-020-68462-9
COMMENT     ##Genome-Assembly-Data-START##
            Assembly Method       :: Unicycler v. 0.4.7
            Genome Coverage       :: 117.0X
            Sequencing Technology :: Illumina MiSeq, PacBio RSII
            ##Genome-Assembly-Data-END##
FEATURES             Qualifiers
     source          /collection_date="1999"
                     /db_xref="taxon:562"
                     /host="Homo sapiens"
                     /mol_type="genomic DNA"
                     /organism="Escherichia coli"
                     /strain="JE86-ST02"
     protein         /gene="csrD"
                     /inference="COORDINATES:ab initio
                     prediction:MetaGeneAnnotator"
                     /inference="similar to AA sequence:INSD:AAC76284.1"
                     /locus_tag="JE86ST02C_37270"
                     /note="DFAST-ECOLI:AAC76284.1 regulatory protein CsrD
                     [pid:99.8%, q_cov:100.0%, s_cov:100.0%, Eval:0.0e+00]"
                     /note="MGA_3732"
                     /transl_table=11
BEGIN
        1 MRLTTKFSAF VTLLTGLTIF VTLLGCSLSF YNAIQYKFSH RVQAVATAID THLVSNDFST
       61 LRPQITELMM SADIVRVDLL HGDKQVYTLA RNGSYRPVGS SDLFRELSVP LIKHPGMSLR
      121 LVYQDPMGNY FHSLMTTAPL TGAIGFIIVM LFLAVRWLQR QLAGQELLET RATRILNGER
      181 GSNVLGTIYE WPPRTSSALD TLLREIQNAR EQHSRLDTLI RSYAAQDVKT GLNNRLFFDN
      241 QLATLLEDQE KVGTHGIVMM IRLPDFNMLS DTWGHSQVEE QFFTLTNLLS TFMMRYPGAL
      301 LARYHRSDFA ALLPHRTLKE AESIAGQLIK AVDTLPNNKM LDRDDMIHIG ICAWRSGQDT
      361 EQVMEHAESA TRNAGLQGGN SWAIYDDSLP EKGRGNVRWR TLIEQMLSRG GPRLYQKPAV
      421 TREGQVHHRE LMCRIFDGNE EVSSAEYMPM VLQFGLSEEY DRLQISRLIP LLRYWPEENL
      481 AIQVTVESLI RPRFQRWLRD TLMQCEKSQR KRIIIELAEA DVGQHISRLQ PVIRLVNALG
      541 VRVAVNQAGL TLVSTSWIKE LNVELLKLHP GLVRNIEKRT ENQLLVQSLV EACSGTSTQV
      601 YATGVRSRSE WQTLIQRGVT GGQGDFFASS QPLDTNVKKY SQRYSV
//