LOCUS       BCA70360.1               477 aa    PRT              BCT 06-NOV-2020
DEFINITION  Escherichia coli RNA polymerase sigma 54 factor RpoN protein.
ACCESSION   AP022811-3684
PROTEIN_ID  BCA70360.1
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5283470)
  AUTHORS   Kimata,K., Lee,K., Watahiki,M., Isobe,J., Ohnishi,M. and Iyoda,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (21-FEB-2020) to the DDBJ/EMBL/GenBank databases.
            Contact:Ken-ichi Lee
            National Institute of Infectious Diseases, Deaprtment of
            Bacteriology I; 1-23-1,Toyama, Shinjuku, Tokyo 162-8640, Japan
REFERENCE   2  
  AUTHORS   Kimata,K., Lee,K., Watahiki,M., Isobe,J., Ohnishi,M. and Iyoda,S.
  TITLE     Global distribution of epidemic-related Shiga toxin 2 encoding
            phages among enteroaggregative Escherichia coli
  JOURNAL   Sci. Rep. 10, 11738 (2020)
  REMARK    Publication Status: Online-Only
            DOI:10.1038/s41598-020-68462-9
COMMENT     ##Genome-Assembly-Data-START##
            Assembly Method       :: Unicycler v. 0.4.7
            Genome Coverage       :: 117.0X
            Sequencing Technology :: Illumina MiSeq, PacBio RSII
            ##Genome-Assembly-Data-END##
FEATURES             Qualifiers
     source          /collection_date="1999"
                     /db_xref="taxon:562"
                     /host="Homo sapiens"
                     /mol_type="genomic DNA"
                     /organism="Escherichia coli"
                     /strain="JE86-ST02"
     protein         /EC_number="2.7.7.6"
                     /gene="rpoN"
                     /inference="COORDINATES:ab initio
                     prediction:MetaGeneAnnotator"
                     /inference="similar to AA sequence:INSD:AAC76234.1"
                     /locus_tag="JE86ST02C_36840"
                     /note="DFAST-ECOLI:AAC76234.1 RNA polymerase sigma 54
                     factor RpoN [pid:96.4%, q_cov:100.0%, s_cov:100.0%,
                     Eval:1.6e-262]"
                     /note="MGA_3689"
                     /transl_table=11
BEGIN
        1 MKQGLQLRLS QQLAMTPQLQ QAIRLLQLST LELQQELQQA LESNPLLEQI DTHEEIDTRE
       61 TQDSETLDTA DALEQKEMPE ELPLDASWDT IYTAGTPSGT SGDYIDDELP VYQGETTQTL
      121 QDYLMWQVEL TPFSDTDRAI ATSIVDAVDD TGYLTVPLED ILESMGDEEI DIDEVEAVLK
      181 RIQRFDPVGV AAKDLRDCLL IQLSQFDKTT PWLEEARLII SDHLDLLANH DFRTLMRVTR
      241 LKEDVLKEAV NLIQSLDPRP GQSIQTGEPE YVIPDVLVRK HNGHWTVELN SDSIPRLQIN
      301 QHYASMCNNA RNDGDSQFIR SNLQDAKWLI KSLESRNDTL LRVSRCIVEQ QQAFFEQGEE
      361 YMKPMVLADI AQAVEMHEST ISRVTTQKYL HSPRGIFELK YFFSSHVNTE GGGEASSTAI
      421 RALVKKLIAA ENPAKPLSDS KLTSLLSEQG IMVARRTVAK YRESLSIPPS NQRKQLV
//