LOCUS       BBK52488.1               298 aa    PRT              BCT 04-APR-2020
DEFINITION  Escherichia coli O145:H28 D,D-dipeptide ABC transporter
            permease ddpC protein.
ACCESSION   AP019706-1906
PROTEIN_ID  BBK52488.1
SOURCE      Escherichia coli O145:H28
  ORGANISM  Escherichia coli O145:H28
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5488534)
  AUTHORS   Nakamura,K., Murase,K., Toyoda,A., Itoh,T., Yoshino,S., Lee,K.,
            Iyoda,S., Ohnishi,M., Ooka,T., Ogura,Y. and Hayashi,T.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2019) to the DDBJ/EMBL/GenBank databases.
            Contact:Keiji Nakamura
            Faculty of Medical Sciences, Kyushu University; Higashi-ku
            Maidashi 3-1-1, Fukuoka, Fukuoka 812-8582, Japan
REFERENCE   2  
  AUTHORS   Nakamura,K., Murase,K., Sato,M.P., Toyoda,A., Itoh,T.,
            Mainil,J.G., Pierard,D., Yoshino,S., Kimata,K., Isobe,J., Seto,K.,
            Etoh,Y., Narimatsu,H., Saito,S., Yatsuyanagi,J., Lee,K., Iyoda,S.,
            Ohnishi,M., Ooka,T., Gotoh,Y., Ogura,Y. and Hayashi,T.
  TITLE     Differential dynamics and impacts of prophages and plasmids on the
            pangenome and virulence factor repertoires of Shiga
            toxin-producing Escherichia coli O145:H28
  JOURNAL   Microb Genom 6, e000323 (2020)
  REMARK    Publication Status: Online-Only
            DOI:10.1099/mgen.0.000323
COMMENT     ##Genome-Assembly-Data-START##
            Assembly Method       :: Canu v. 1.5
            Genome Coverage       :: 150x
            Sequencing Technology :: Illumina MiSeq; PacBio RS II
            ##Genome-Assembly-Data-END##
FEATURES             Qualifiers
     source          /collection_date="2011"
                     /country="Japan:Fukushima"
                     /db_xref="taxon:1078034"
                     /isolation_source="human feces"
                     /mol_type="genomic DNA"
                     /organism="Escherichia coli O145:H28"
                     /serovar="O145:H28"
                     /strain="112648"
     protein         /gene="ddpC"
                     /inference="ab initio prediction:Prodigal:2.6"
                     /inference="similar to AA sequence:INSD:AAC74558.1"
                     /locus_tag="EC112648_1906"
                     /transl_table=11
BEGIN
        1 MMLSEETSAV RPAKQTRFNG AKLVWMLKGS PLTVTGAVII VLMLLMMIFS PWLATHDPNA
       61 IDLTARLLPP SAAHWFGTDE VGRDLFSRVL VGSQQSILAG LVVVAIAGMI GSLLGCLSGV
      121 LGGRADAIIM RIMDIMLSIP SLVLTMALAA ALGPSLFNAM LAIAIVRIPF YVRLARGQAL
      181 VVRQYTYVQA AKTFGASRWH LISWHILRNS LPPLIVQASL DIGSAILMAA TLGFIGLGAQ
      241 QPSAEWGAMV ANGRNYVLDQ WWYCAFPGAA ILLTAVGFNL FGDGIRDLLD PKAGGKQS
//