LOCUS       BBI27671.1              1173 aa    PRT              BCT 20-JUN-2019
DEFINITION  Enterococcus faecium transcription-repair coupling factor protein.
ACCESSION   AP019394-2252
PROTEIN_ID  BBI27671.1
SOURCE      Enterococcus faecium
  ORGANISM  Enterococcus faecium
            Bacteria; Bacillota; Bacilli; Lactobacillales; Enterococcaceae;
            Enterococcus.
REFERENCE   1  (bases 1 to 2535796)
  AUTHORS   Kanesaki,Y.
  TITLE     Direct Submission
  JOURNAL   Submitted (18-JAN-2019) to the DDBJ/EMBL/GenBank databases.
            Contact:Yu Kanesaki
            Tokyo University of Agriculture, NODAI Genome Research Center;
            Sakuragaoka 1-1-1, Setagaya, Tokyo 156-8502, Japan
REFERENCE   2  
  AUTHORS   Abe,K., Kanesaki,Y., Abdel-Rahman,M.A., Watanabe,S., Zendo,T.,
            Chibazakura,T., Shimizu-Kadota,M., Sonomoto,K. and Yoshikawa,H.
  TITLE     Complete Genome Sequence of Enterococcus faecium QU50, a
            Thermophilic Lactic Acid Bacterium Capable of Metabolizing Xylose
  JOURNAL   Microbiol Resour Announc 8, e00413-19 (2019)
  REMARK    Publication Status: Online-Only
            DOI:10.1128/MRA.00413-19
REFERENCE   3  
  AUTHORS   Abdel-Rahman,M.A., Tashiro,Y., Zendo,T., Sakai,K. and Sonomoto,K.
  TITLE     Enterococcus faecium QU 50: a novel thermophilic lactic acid
            bacterium for high-yield l-lactic acid production from xylose.
  JOURNAL   FEMS Microbiol. Lett. 8, 15-20 (2015)
COMMENT     Annotated using prokka 1.11 from http://www.vicbioinformatics.com.
            Annotated at DFAST https://dfast.nig.ac.jp/
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: RS_HGAP Asembly v. 2; CLC Genomics
                                     workbench v. 7.5
            Genome Coverage       :: 192x
            Sequencing Technology :: PacBio RSII, Illumina MiSeq
            ##Genome-Assembly-Data-END##
FEATURES             Qualifiers
     source          /collection_date="2013-10-25"
                     /country="Egypt: Kafr-El-Sheik governorate"
                     /db_xref="taxon:1352"
                     /isolation_source="Eutrophic soil"
                     /mol_type="genomic DNA"
                     /organism="Enterococcus faecium"
                     /strain="QU 50"
     protein         /gene="mfd"
                     /inference="ab initio prediction:Prodigal:2.6"
                     /inference="similar to AA sequence:INSD:AAO80122.1"
                     /locus_tag="EFQU50X_02327"
                     /transl_table=11
BEGIN
        1 MDIIQLVGKD PQVKEWVSNL EEKMPRQLIT GLAGSAKTLL FARAFKKTNK NMIILMPNLY
       61 YANQLAEDLQ HVIPQDQIHL FPVDEVLSAE MAFSSPEARG ERVATLNALQ EKKAGIYLLP
      121 VASLHKRLPN KKTWLQAQLN WHIGDEIDVE NLPRQLTLMG YVREEMVAKP GEFSIRGSII
      181 DIYPLTTTYP VRVELFDVEI DSMRYFEAET QRSIEKTEEI WVSPTSEQVY GPEDLEHGIE
      241 QMQKMLEKRL AATTEEADRE FLQDYFGQLT SSWQAGVPTE EAKFYSDLLY QESVTILDYF
      301 PSNSLLVVDD YQRIMETNRE IEREAAEWQT QKISELRVFS EQTFSADIQK IVQKEKFTTT
      361 FFSLFQKGMG NLRFQAIHNF QYRTMQQFFG QMPLLKTEMD RWRKQKQTVV IFIPTKDRIR
      421 KAEQMLRDED ILVVETEKNA LIRGQVQLVE GALQAGFELP QEKIVAITEK EIFQKTTKKQ
      481 TRRQTVTNAE RLKSYNELKA GDYVVHANHG IGKYIGMETL EVDGVHQDYM TILYQNDDKL
      541 FIPVTQLNLI QKYVASEAKA PRINKLGGSE WTKTKRKVSS KIEDIADDLI KLYAARESEK
      601 GYAFGPDDAY QKEFENAFPY SETDDQLRSA AEIKRDMEKE KPMDRLLVGD VGYGKTEVAL
      661 RAAFKAIKES KQVAFLVPTT ILAQQHYETM LERFEGFPVN IGLLSRFRTR KQQKETIEQL
      721 RTGQVDIVVG THRILSKDIE FSDLGLLIID EEQRFGVKHK ERLKQLRAQV DVLTLTATPI
      781 PRTLHMSMLG VRDLSVIETP PANRYPIQTY VMEKNPGAIR EAIHREMGRG GQVFYLYNRV
      841 ETIEQKVEEI QELVPEARIG YAHGQMTEAQ LENTLFEFIE GQYDVLVTTT IIETGVDIPN
      901 ANTLFVENAD YMGLSTLYQL RGRVGRSSRV AYAYFMYEQQ KILNEVSEKR LQAIKDFTEL
      961 GSGFKIAMRD LSIRGAGNLL GAQQHGFIDA VGFDMYSQML SEAVSRKQGK NSQVEKTTVE
     1021 IDLGVDAYLP ETYVADQRQK IEIYKRIREL DSQEMLDELE DDLLDRFGEY PEEVAHLLTI
     1081 GQIKMDGDRA LLETIRKQEA HIVFTLSKVG TKRYSVEQLF EALTATKLKA SLGVEKEQMV
     1141 IRLTIPNQME EAVWLQEIQK FVKALREQKY LSA
//