LOCUS       BBE14486.1               670 aa    PRT              BCT 03-AUG-2018
DEFINITION  Vibrio cholerae regulatory protein CsrD protein.
ACCESSION   AP018677-3308
PROTEIN_ID  BBE14486.1
SOURCE      Vibrio cholerae
  ORGANISM  Vibrio cholerae
            Bacteria; Pseudomonadota; Gammaproteobacteria; Vibrionales;
            Vibrionaceae; Vibrio.
REFERENCE   1  (bases 1 to 4057041)
  AUTHORS   Yamamoto,S. and Lee,K.
  TITLE     Direct Submission
  JOURNAL   Submitted (17-MAY-2018) to the DDBJ/EMBL/GenBank databases.
            Contact:Shouji Yamamoto
            National Institute of Infectious Diseases; Toyama 1-23-1, Tokyo
            162-8640, Japan
REFERENCE   2  
  AUTHORS   Yamamoto,S., Lee,K., Morita,M., Arakawa,E., Izumiya,H. and
            Ohnishi,M.
  TITLE     Single Circular Chromosome Identified from the Genome Sequence of
            the Vibrio cholerae O1 bv. El Tor Ogawa Strain V060002
  JOURNAL   Genome Announc 6, e00564-18 (2018)
  REMARK    Publication Status: Online-Only
            DOI:10.1128/genomeA.00564-18
COMMENT     Annotated using prokka 1.11 from http://www.vicbioinformatics.com.
            Annotated at DFAST https://dfast.nig.ac.jp/
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: HGAP v. 3
            Genome Coverage       :: 196.55x
            Sequencing Technology :: PacBio RS II
            ##Genome-Assembly-Data-END##
FEATURES             Qualifiers
     source          /db_xref="taxon:666"
                     /host="Homo sapiens"
                     /mol_type="genomic DNA"
                     /organism="Vibrio cholerae"
                     /strain="V060002"
     protein         /gene="csrD"
                     /inference="ab initio prediction:Prodigal:2.6"
                     /inference="similar to AA sequence:INSD:AAC76284.1"
                     /locus_tag="V060002_03396"
                     /transl_table=11
BEGIN
        1 MRYTPTLKLS TRLVAFVTMT VISAMFILFL GGTLSFQRLG QEYLNHYLQG IVEVVDKEME
       61 DPDAAYSMQR WMPKMLQASG IIEMQLTSEA GPIYRFKDTT NTIEASRLHQ VALPLKRNPG
      121 YVMHFKAVPP YLNYNYSLQA MWSTTLAVLL IVFFLIRGLK WLKEQLLGSE LLEERGRMIL
      181 AGRVEQHAKG DPREWPFTAS EALDRLIEEL QDARQERSRF DTFIRSQTFL DQLTGTANRV
      241 LYDSKLESAL LESGAHGGVM MLRVDDLESA REESPKRTLD EFIIEVGECL SNIVQRYPDA
      301 ILSRYYEDVF ALFIPHQGSK DIAQVATQAI KLIERINPPE PLPEDNWFHI GVTMYQEGER
      361 RGRIIDEMET ALKSAQLQGV NAWSRFQKPK QLQEDRGSVR WRTLFEQVLR PEEILLYRQA
      421 CYRISANGER EFLHYELFAR IQDPQQGILK ASRFSSALET VGYEAMLDRA VFSSVVSFLK
      481 RSELVEPLSV NLHVVPFNDK RYARWIRNEL MQMPFSLRTA LSFEFSEAHL VNHLDYMRPI
      541 IRMLAGLGCK IVVGQAGRTI VSTHYIKDLK VNYLKLHRSL IKKIDQRHEN QLFVRSLVGV
      601 CGGTQAEVVA VGVETTQEWQ TLQMLGVSGV QGRLFDEEQQ MLPPLPPEPL KRPPRLSVKP
      661 IGKRNRWRTK
//