LOCUS       BBE13148.1               472 aa    PRT              BCT 03-AUG-2018
DEFINITION  Vibrio cholerae GntR family transcriptional regulator protein.
ACCESSION   AP018677-1970
PROTEIN_ID  BBE13148.1
SOURCE      Vibrio cholerae
  ORGANISM  Vibrio cholerae
            Bacteria; Pseudomonadota; Gammaproteobacteria; Vibrionales;
            Vibrionaceae; Vibrio.
REFERENCE   1  (bases 1 to 4057041)
  AUTHORS   Yamamoto,S. and Lee,K.
  TITLE     Direct Submission
  JOURNAL   Submitted (17-MAY-2018) to the DDBJ/EMBL/GenBank databases.
            Contact:Shouji Yamamoto
            National Institute of Infectious Diseases; Toyama 1-23-1, Tokyo
            162-8640, Japan
REFERENCE   2  
  AUTHORS   Yamamoto,S., Lee,K., Morita,M., Arakawa,E., Izumiya,H. and
            Ohnishi,M.
  TITLE     Single Circular Chromosome Identified from the Genome Sequence of
            the Vibrio cholerae O1 bv. El Tor Ogawa Strain V060002
  JOURNAL   Genome Announc 6, e00564-18 (2018)
  REMARK    Publication Status: Online-Only
            DOI:10.1128/genomeA.00564-18
COMMENT     Annotated using prokka 1.11 from http://www.vicbioinformatics.com.
            Annotated at DFAST https://dfast.nig.ac.jp/
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: HGAP v. 3
            Genome Coverage       :: 196.55x
            Sequencing Technology :: PacBio RS II
            ##Genome-Assembly-Data-END##
FEATURES             Qualifiers
     source          /db_xref="taxon:666"
                     /host="Homo sapiens"
                     /mol_type="genomic DNA"
                     /organism="Vibrio cholerae"
                     /strain="V060002"
     protein         /gene="ydcR"
                     /inference="ab initio prediction:Prodigal:2.6"
                     /inference="similar to AA sequence:INSD:AAC74521.1"
                     /locus_tag="V060002_02020"
                     /transl_table=11
BEGIN
        1 MKKSQVLANT IKSQIEQNIW LSGEKIPSIR STCKRYKLSI ETVLQAYQQL EDQGYIRAKA
       61 KSGYVVLPRR NTLFAGNLSA KVIKPYPVKI SDLLYDVLQR AKDPEIIPFS SAFPDPALFP
      121 HQALSRSLAN ASRQMLGSCM LTNLPPGSQT LRRQIAQRYQ KSGLNVLPDD IVITSGAMEA
      181 LNLCLQSCTK PGDLVAIEYP AFYGVLQAIE RLNLTAVEIP TDPRDGIDLD VLASVFSSMD
      241 IKACWFMTES QNPLGYSMSE TNKQRLAELV NHYQIPMIED DVYRELGIGN PSSLPAKAYD
      301 KVGNILLCGS FSKSLSPGFR IGWVVAGERA LNIQRLQHLS TLSSSIPIQL GLSHYLTFYN
      361 FDHHLKKLRK LLNERKKAHA ELLRTYLPHN TKIHLNNGGY FIWVELPQTI YAETLYEQAL
      421 EHNIAIAPGI LFSSDKRFSH HIRLNCSYAC DERIEQAIQT LGQLIHTMEI NR
//