LOCUS BAE76043.1 865 aa PRT BCT 29-SEP-2018 DEFINITION Escherichia coli str. K-12 substr. W3110 predicted outer membrane usher protein protein. ACCESSION AP009048-136 PROTEIN_ID BAE76043.1 SOURCE Escherichia coli str. K-12 substr. W3110 ORGANISM Escherichia coli str. K-12 substr. W3110 Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia. REFERENCE 1 (bases 1 to 4646332) AUTHORS Mori,H., Hirai,A., Morooka,N. and Horiuchi,T. TITLE Direct Submission JOURNAL Submitted (22-AUG-2005) to the DDBJ/EMBL/GenBank databases. Contact:Hirotada Mori Graduate School of Biological Sciences, Nara Institute of Science and Technology; 8916-5 Takayama, Ikoma, Nara 630-0101, Japan REFERENCE 2 AUTHORS Hayashi,K., Morooka,N., Yamamoto,Y., Fujita,K., Isono,K., Choi,S., Ohtsubo,E., Baba,T., Wanner,B.L., Mori,H. and Horiuchi,T. TITLE Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110 JOURNAL Mol. Syst. Biol. 2, 2006.0007 (2006) REMARK Publication Status: Online-Only REFERENCE 3 AUTHORS Riley,M., Abe,T., Arnaud,M.B., Berlyn,M.K., Blattner,F.R., Chaudhuri,R.R., Glasner,J.D., Horiuchi,T., Keseler,I.M., Kosuge,T., Mori,H., Perna,N.T., Plunkett,G.III., Rudd,K.E., Serres,M.H., Thomas,G.H., Thomson,N.R., Wishart,D. and Wanner,B.L. TITLE Escherichia coli K-12: a cooperatively developed annotation snapshot--2005 JOURNAL Nucleic Acids Res. 34, 1-9 (2006) REFERENCE 4 AUTHORS Yamamoto,Y., Aiba,H., Baba,T., Hayashi,K., Inada,T., Isono,K., Itoh,T., Kimura,S., Kitagawa,M., Makino,K., Miki,T., Mitsuhashi,N., Mizobuchi,K., Mori,H., Nakade,S., Nakamura,Y., Nashimoto,H., Oshima,T., Oyama,S., Saito,N., Sampei,G., Satoh,Y., Sivasundaram,S., Tagami,H., Takahashi,H., Takeda,J., Takemoto,K., Uehara,K., Wada,C., Yamagata,S. and Horiuchi,T. TITLE Construction of a contiguous 874-kb sequence of the Escherichia coli -K12 genome corresponding to 50.0-68.8 min on the linkage map and analysis of its sequence features JOURNAL DNA Res. 4, 91-113 (1997) REFERENCE 5 AUTHORS Itoh,T., Aiba,H., Baba,T., Hayashi,K., Inada,T., Isono,K., Kasai,H., Kimura,S., Kitakawa,M., Kitagawa,M., Makino,K., Miki,T., Mizobuchi,K., Mori,H., Mori,T., Motomura,K., Nakade,S., Nakamura,Y., Nashimoto,H., Nishio,Y., Oshima,T., Saito,N., Sampei,G., Seki,Y., Sivasundaram,S., Tagami,H., Takeda,J., Takemoto,K., Wada,C., Yamamoto,Y. and Horiuchi,T. TITLE A 460-kb DNA sequence of the Escherichia coli K-12 genome corresponding to the 40.1-50.0 min region on the linkage map JOURNAL DNA Res. 3, 379-392 (1996) REFERENCE 6 AUTHORS Aiba,H., Baba,T., Hayashi,K., Inada,T., Isono,K., Itoh,T., Kasai,H., Kashimoto,K., Kimura,S., Kitakawa,M., Kitagawa,M., Makino,K., Miki,T., Mizobuchi,K., Mori,H., Mori,T., Motomura,K., Nakade,S., Nakamura,Y., Nashimoto,H., Nishio,Y., Oshima,T., Saito,N., Sampei,G., Seki,Y., Sivasundaram,S., Tagami,H., Takeda,J., Takemoto,K., Takeuchi,Y., Wada,C., Yamamoto,Y. and Horiuchi,T. TITLE A 570-kb DNA sequence of the Escherichia coli K-12 genome corresponding to the 28.0-40.1 min region on the linkage map JOURNAL DNA Res. 3, 363-377 (1996) REFERENCE 7 AUTHORS Arn,E.A. and Abelson,J.N. TITLE The 2'-5' RNA ligase of Escherichia coli. Purification, cloning, and genomic disruption JOURNAL J. Biol. Chem. 271, 31145-31153 (1996) REFERENCE 8 AUTHORS Oshima,T., Aiba,H., Baba,T., Fujita,K., Hayashi,K., Honjo,A., Ikemoto,K., Inada,T., Itoh,T., Kajihara,M., Kanai,K., Kashimoto,K., Kimura,S., Kitagawa,M., Makino,K., Masuda,S., Miki,T., Mizobuchi,K., Mori,H., Motomura,K., Nakamura,Y., Nashimoto,H., Nishio,Y., Saito,N., Sampei,G., Seki,Y., Tagami,H., Takemoto,K., Wada,C., Yamamoto,Y., Yano,M. and Horiuchi,T. TITLE A 718-kb DNA sequence of the Escherichia coli K-12 genome corresponding to the 12.7-28.0 min region on the linkage map JOURNAL DNA Res. 3, 137-155 (1996) REFERENCE 9 AUTHORS Fujita,N., Mori,H., Yura,T. and Ishihama,A. TITLE Systematic sequencing of the Escherichia coli genome: analysis of the 2.4-4.1 min (110,917-193,643 bp) region JOURNAL Nucleic Acids Res. 22, 1637-1639 (1994) REFERENCE 10 AUTHORS Janosi,L., Shimizu,I. and Kaji,A. TITLE Ribosome recycling factor (ribosome releasing factor) is essential for bacterial growth JOURNAL Proc. Natl. Acad. Sci. U.S.A. 91, 4249-4253 (1994) REFERENCE 11 AUTHORS Allikmets,R., Gerrard,B., Court,D. and Dean,M. TITLE Cloning and organization of the abc and mdl genes of Escherichia coli: relationship to eukaryotic multidrug resistance JOURNAL Gene 136, 231-236 (1993) REFERENCE 12 AUTHORS van Heeswijk,W.C., Rabenberg,M., Westerhoff,H.V. and Kahn,D. TITLE The genes of the glutamine synthetase adenylylation cascade are not regulated by nitrogen in Escherichia coli JOURNAL Mol. Microbiol. 9, 443-457 (1993) REFERENCE 13 AUTHORS Zhao,S., Sandt,C.H., Feulner,G., Vlazny,D.A., Gray,J.A. and Hill,C.W. TITLE Rhs elements of Escherichia coli K-12: complex composites of shared and unique components that have different evolutionary histories JOURNAL J. Bacteriol. 175, 2799-2808 (1993) REFERENCE 14 AUTHORS Yamada,M., Asaoka,S., Saier,M.H. Jr and Yamada,Y. TITLE Characterization of the gcd gene from Escherichia coli K-12 W3110 and regulation of its expression JOURNAL J. Bacteriol. 175, 568-571 (1993) REFERENCE 15 AUTHORS Cormack,R.S. and Mackie,G.A. TITLE Structural requirements for the processing of Escherichia coli 5 S ribosomal RNA by RNase E in vitro JOURNAL J. Mol. Biol. 228, 1078-1090 (1992) REFERENCE 16 AUTHORS Gervais,F.G. and Drapeau,G.R. TITLE Identification, cloning, and characterization of rcsF, a new regulator gene for exopolysaccharide synthesis that suppresses the division mutation ftsZ84 in Escherichia coli K-12 JOURNAL J. Bacteriol. 174, 8016-8022 (1992) REFERENCE 17 AUTHORS Yamanaka,K., Ogura,T., Niki,H. and Hiraga,S. TITLE Identification and characterization of the smbA gene, a suppressor of the mukB null mutant of Escherichia coli JOURNAL J. Bacteriol. 174, 7517-7526 (1992) REFERENCE 18 AUTHORS Condon,C., Philips,J., Fu,Z.Y., Squires,C. and Squires,C.L. TITLE Comparison of the expression of the seven ribosomal RNA operons in Escherichia coli JOURNAL EMBO J. 11, 4175-4185 (1992) REFERENCE 19 AUTHORS Talarico,T.L., Ray,P.H., Dev,I.K., Merrill,B.M. and Dallas,W.S. TITLE Cloning, sequence analysis, and overexpression of Escherichia coli folK, the gene coding for 7,8-dihydro-6-hydroxymethylpterin- pyrophosphokinase JOURNAL J. Bacteriol. 174, 5971-5977 (1992) REFERENCE 20 AUTHORS Arnqvist,A., Olsen,A., Pfeifer,J., Russell,D.G. and Normark,S. TITLE The Crl protein activates cryptic genes for curli formation and fibronectin binding in Escherichia coli HB101 JOURNAL Mol. Microbiol. 6, 2443-2452 (1992) REFERENCE 21 AUTHORS Li,S.J. and Cronan,J.E. Jr TITLE The genes encoding the two carboxyltransferase subunits of Escherichia coli acetyl-CoA carboxylase JOURNAL J. Biol. Chem. 267, 16841-16847 (1992) REFERENCE 22 AUTHORS Yura,T., Mori,H., Nagai,H., Nagata,T., Ishihama,A., Fujita,N., Isono,K., Mizobuchi,K. and Nakata,A. TITLE Systematic sequencing of the Escherichia coli genome: analysis of the 0-2.4 min region JOURNAL Nucleic Acids Res. 20, 3305-3308 (1992) REFERENCE 23 AUTHORS Ghosh,S.K., Biswas,S.K., Paul,K. and Das,J. TITLE Nucleotide and deduced amino acid sequence of the recA gene of Vibrio cholerae JOURNAL Nucleic Acids Res. 20, 372 (1992) REFERENCE 24 AUTHORS Smallshaw,J.E. and Kelln,R.A. TITLE Cloning, nucleotide sequence and expression of the Escherichia coli K-12 pyrH gene encoding UMP kinase JOURNAL Genetics (Life Sci. Adv.) 11, 59-65 (1992) REFERENCE 25 AUTHORS O'Neill,G.P., Grygorczyk,R., Adam,M. and Ford-Hutchinson,A.W. TITLE The nucleotide sequence of a voltage-gated chloride channel from the electric organ of Torpedo californica JOURNAL Biochim. Biophys. Acta 1129, 131-134 (1991) REFERENCE 26 AUTHORS Kajie,S., Ideta,R., Yamato,I. and Anraku,Y. TITLE Molecular cloning and DNA sequence of dniR, a gene affecting anaerobic expression of the Escherichia coli hexaheme nitrite reductase JOURNAL FEMS Microbiol. Lett. 67, 205-211 (1991) REFERENCE 27 AUTHORS Hershfield,M.S., Chaffee,S., Koro-Johnson,L., Mary,A., Smith,A.A. and Short,S.A. TITLE Use of site-directed mutagenesis to enhance the epitope-shielding effect of covalent modification of proteins with polyethylene glycol JOURNAL Proc. Natl. Acad. Sci. U.S.A. 88, 7185-7189 (1991) REFERENCE 28 AUTHORS Shimizu,I. and Kaji,A. TITLE Identification of the promoter region of the ribosome-releasing factor cistron (frr) JOURNAL J. Bacteriol. 173, 5181-5187 (1991) REFERENCE 29 AUTHORS Poulsen,L.K., Refn,A., Molin,S. and Andersson,P. TITLE The gef gene from Escherichia coli is regulated at the level of translation JOURNAL Mol. Microbiol. 5, 1639-1648 (1991) REFERENCE 30 AUTHORS Poulsen,L.K., Refn,A., Molin,S. and Andersson,P. TITLE Topographic analysis of the toxic Gef protein from Escherichia coli JOURNAL Mol. Microbiol. 5, 1627-1637 (1991) REFERENCE 31 AUTHORS Kawamukai,M., Utsumi,R., Takeda,K., Higashi,A., Matsuda,H., Choi,Y.L. and Komano,T. TITLE Nucleotide sequence and characterization of the sfs1 gene: sfs1 is involved in CRP*-dependent mal gene expression in Escherichia coli JOURNAL J. Bacteriol. 173, 2644-2648 (1991) REFERENCE 32 AUTHORS Hulton,C.S., Higgins,C.F. and Sharp,P.M. TITLE ERIC sequences: a novel family of repetitive elements in the genomes of Escherichia coli, Salmonella typhimurium and other enterobacteria JOURNAL Mol. Microbiol. 5, 825-834 (1991) REFERENCE 33 AUTHORS Arigoni,F., Kaminski,P.A., Hennecke,H. and Elmerich,C. TITLE Nucleotide sequence of the fixABC region of Azorhizobium caulinodans ORS571: similarity of the fixB product with eukaryotic flavoproteins, characterization of fixX, and identification of nifW JOURNAL Mol. Gen. Genet. 225, 514-520 (1991) REFERENCE 34 AUTHORS Munro,A.W., Ritchie,G.Y., Lamb,A.J., Douglas,R.M. and Booth,I.R. TITLE The cloning and DNA sequence of the gene for the glutathione-regulated potassium-efflux system KefC of Escherichia coli JOURNAL Mol. Microbiol. 5, 607-616 (1991) REFERENCE 35 AUTHORS Mattick,J.S., Anderson,B.J., Cox,P.T., Dalrymple,B.P., Bills,M.M., Hobbs,M. and Egerton,J.R. TITLE Gene sequences and comparison of the fimbrial subunits representative of Bacteroides nodosus serotypes A to I: class I and class II strains JOURNAL Mol. Microbiol. 5, 561-573 (1991) REFERENCE 36 AUTHORS Company,M., Arenas,J. and Abelson,J. TITLE Requirement of the RNA helicase-like protein PRP22 for release of messenger RNA from spliceosomes JOURNAL Nature 349, 487-493 (1991) REFERENCE 37 AUTHORS Umeda,M. and Ohtsubo,E. TITLE Four types of IS1 with differences in nucleotide sequence reside in the Escherichia coli K-12 chromosome JOURNAL Gene 98, 1-5 (1991) REFERENCE 38 AUTHORS Hirvas,L., Koski,P. and Vaara,M. TITLE The ompH gene of Yersinia enterocolitica: cloning, sequencing, expression, and comparison with known enterobacterial ompH sequences JOURNAL J. Bacteriol. 173, 1223-1229 (1991) REFERENCE 39 AUTHORS Bouvier,J. and Stragier,P. TITLE Nucleotide sequence of the lsp-dapB interval in Escherichia coli JOURNAL Nucleic Acids Res. 19, 180 (1991) REFERENCE 40 AUTHORS Dicker,I.B. and Seetharam,S. TITLE Cloning and nucleotide sequence of the firA gene and the firA200(Ts) allele from Escherichia coli JOURNAL J. Bacteriol. 173, 334-344 (1991) REFERENCE 41 AUTHORS Allen,B.L., Gerlach,G.F. and Clegg,S. TITLE Nucleotide sequence and functions of mrk determinants necessary for expression of type 3 fimbriae in Klebsiella pneumoniae JOURNAL J. Bacteriol. 173, 916-920 (1991) REFERENCE 42 AUTHORS Grimm,B., Bull,A. and Breu,V. TITLE Structural genes of glutamate 1-semialdehyde aminotransferase for porphyrin synthesis in a cyanobacterium and Escherichia coli JOURNAL Mol. Gen. Genet. 225, 1-10 (1991) REFERENCE 43 AUTHORS Chen,H., Lawrence,C.B., Bryan,S.K. and Moses,R.E. TITLE Aphidicolin inhibits DNA polymerase II of Escherichia coli, an alpha-like DNA polymerase JOURNAL Nucleic Acids Res. 18, 7185-7186 (1990) REFERENCE 44 AUTHORS Mallonee,D.H., White,W.B. and Hylemon,P.B. TITLE Cloning and sequencing of a bile acid-inducible operon from Eubacterium sp. strain VPI 12708 JOURNAL J. Bacteriol. 172, 7011-7019 (1990) REFERENCE 45 AUTHORS Young,C., Collins-Emerson,J.M., Terzaghi,E.A. and Scott,D.B. TITLE Nucleotide sequence of Rhizobium loti nodI JOURNAL Nucleic Acids Res. 18, 6691 (1990) REFERENCE 46 AUTHORS Chen,H., Sun,Y., Stark,T., Beattie,W. and Moses,R.E. TITLE Nucleotide sequence and deletion analysis of the polB gene of Escherichia coli JOURNAL DNA Cell Biol. 9, 613-635 (1990) REFERENCE 47 AUTHORS Eriani,G., Delarue,M., Poch,O., Gangloff,J. and Moras,D. TITLE Partition of tRNA synthetases into two classes based on mutually exclusive sets of sequence motifs JOURNAL Nature 347, 203-206 (1990) REFERENCE 48 AUTHORS Showalter,R.E. and Silverman,M.R. TITLE Nucleotide sequence of a gene, hpt, for hypoxanthine phosphoribosyltransferase from Vibrio harveyi JOURNAL Nucleic Acids Res. 18, 4621 (1990) REFERENCE 49 AUTHORS Martin-Verstraete,I., Debarbouille,M., Klier,A. and Rapoport,G. TITLE Levanase operon of Bacillus subtilis includes a fructose-specific phosphotransferase system regulating the expression of the operon JOURNAL J. Mol. Biol. 214, 657-671 (1990) REFERENCE 50 AUTHORS Henrich,B., Monnerjahn,U. and Plapp,R. TITLE Peptidase D gene (pepD) of Escherichia coli K-12: nucleotide sequence, transcript mapping, and comparison with other peptidase genes JOURNAL J. Bacteriol. 172, 4641-4651 (1990) REFERENCE 51 AUTHORS Nunn,D., Bergman,S. and Lory,S. TITLE Products of three accessory genes, pilB, pilC, and pilD, are required for biogenesis of Pseudomonas aeruginosa pili JOURNAL J. Bacteriol. 172, 2911-2919 (1990) REFERENCE 52 AUTHORS Rosenthal,E.R. and Calvo,J.M. TITLE The nucleotide sequence of leuC from Salmonella typhimurium JOURNAL Nucleic Acids Res. 18, 3072 (1990) REFERENCE 53 AUTHORS Kang,P.J. and Craig,E.A. TITLE Identification and characterization of a new Escherichia coli gene that is a dosage-dependent suppressor of a dnaK deletion mutation JOURNAL J. Bacteriol. 172, 2055-2064 (1990) REFERENCE 54 AUTHORS Wurgler,S.M. and Richardson,C.C. TITLE Structure and regulation of the gene for dGTP triphosphohydrolase from Escherichia coli JOURNAL Proc. Natl. Acad. Sci. U.S.A. 87, 2740-2744 (1990) REFERENCE 55 AUTHORS Schaaff,I., Hohmann,S. and Zimmermann,F.K. TITLE Molecular analysis of the structural gene for yeast transaldolase JOURNAL Eur. J. Biochem. 188, 597-603 (1990) REFERENCE 56 AUTHORS Ricca,E. and Calvo,J.M. TITLE The nucleotide sequence of leuA from Salmonella typhimurium JOURNAL Nucleic Acids Res. 18, 1290 (1990) REFERENCE 57 AUTHORS Honore,N. and Cole,S.T. TITLE Nucleotide sequence of the aroP gene encoding the general aromatic amino acid transport protein of Escherichia coli K-12: homology with yeast transport proteins JOURNAL Nucleic Acids Res. 18, 653 (1990) REFERENCE 58 AUTHORS Angerer,A., Gaisser,S. and Braun,V. TITLE Nucleotide sequences of the sfuA, sfuB, and sfuC genes of Serratia marcescens suggest a periplasmic-binding-protein-dependent iron transport mechanism JOURNAL J. Bacteriol. 172, 572-578 (1990) REFERENCE 59 AUTHORS Surin,B.P., Watson,J.M., Hamilton,W.D., Economou,A. and Downie,J.A. TITLE Molecular characterization of the nodulation gene, nodT, from two biovars of Rhizobium leguminosarum JOURNAL Mol. Microbiol. 4, 245-252 (1990) REFERENCE 60 AUTHORS Zhou,Z. and Syvanen,M. TITLE Identification and sequence of the drpA gene from Escherichia coli JOURNAL J. Bacteriol. 172, 281-286 (1990) REFERENCE 61 AUTHORS Roncero,M.I., Jepsen,L.P., Stroman,P. and van Heeswijck,R. TITLE Characterization of a leuA gene and an ARS element from Mucor circinelloides JOURNAL Gene 84, 335-343 (1989) REFERENCE 62 AUTHORS Ichikawa,S. and Kaji,A. TITLE Molecular cloning and expression of ribosome releasing factor JOURNAL J. Biol. Chem. 264, 20054-20059 (1989) REFERENCE 63 AUTHORS Minami-Ishii,N., Taketani,S., Osumi,T. and Hashimoto,T. TITLE Molecular cloning and sequence analysis of the cDNA for rat mitochondrial enoyl-CoA hydratase. Structural and evolutionary relationships linked to the bifunctional enzyme of the peroxisomal beta-oxidation system JOURNAL Eur. J. Biochem. 185, 73-78 (1989) REFERENCE 64 AUTHORS Matsubara,Y., Indo,Y., Naito,E., Ozasa,H., Glassberg,R., Vockley,J., Ikeda,Y., Kraus,J. and Tanaka,K. TITLE Molecular cloning and nucleotide sequence of cDNAs encoding the precursors of rat long chain acyl-coenzyme A, short chain acyl-coenzyme A, and isovaleryl-coenzyme A dehydrogenases. Sequence homology of four enzymes of the acyl-CoA dehydrogenase family JOURNAL J. Biol. Chem. 264, 16321-16331 (1989) REFERENCE 65 AUTHORS Roa,B.B., Connolly,D.M. and Winkler,M.E. TITLE Overlap between pdxA and ksgA in the complex pdxA-ksgA-apaG-apaH operon of Escherichia coli K-12 JOURNAL J. Bacteriol. 171, 4767-4777 (1989) REFERENCE 66 AUTHORS Xie,Q.W., Tabor,C.W. and Tabor,H. TITLE Spermidine biosynthesis in Escherichia coli: promoter and termination regions of the speED operon JOURNAL J. Bacteriol. 171, 4457-4465 (1989) REFERENCE 67 AUTHORS Lindquist,S., Galleni,M., Lindberg,F. and Normark,S. TITLE Signalling proteins in enterobacterial AmpC beta-lactamase regulation JOURNAL Mol. Microbiol. 3, 1091-1102 (1989) REFERENCE 68 AUTHORS Sato,S., Nakada,Y. and Shiratsuchi,A. TITLE IS421, a new insertion sequence in Escherichia coli JOURNAL FEBS Lett. 249, 21-26 (1989) REFERENCE 69 AUTHORS Liu,J.D. and Parkinson,J.S. TITLE Genetics and sequence analysis of the pcnB locus, an Escherichia coli gene involved in plasmid copy number control JOURNAL J. Bacteriol. 171, 1254-1261 (1988) REFERENCE 70 AUTHORS Henrich,B., Schroeder,U., Frank,R.W. and Plapp,R. TITLE Accurate mapping of the Escherichia coli pepD gene by sequence analysis of its 5' flanking region JOURNAL Mol. Gen. Genet. 215, 369-373 (1989) REFERENCE 71 AUTHORS Lipinska,B., Sharma,S. and Georgopoulos,C. TITLE Sequence analysis and regulation of the htrA gene of Escherichia coli: a sigma 32-independent mechanism of heat-inducible transcription JOURNAL Nucleic Acids Res. 16, 10053-10067 (1988) REFERENCE 72 AUTHORS Sung,Y.C. and Fuchs,J.A. TITLE Characterization of the cyn operon in Escherichia coli K12 JOURNAL J. Biol. Chem. 263, 14769-14775 (1988) REFERENCE 73 AUTHORS Andrews,S.C. and Guest,J.R. TITLE Nucleotide sequence of the gene encoding the GMP reductase of Escherichia coli K12 JOURNAL Biochem. J. 255, 35-43 (1988) REFERENCE 74 AUTHORS Lozoya,E., Hoffmann,H., Douglas,C., Schulz,W., Scheel,D. and Hahlbrock,K. TITLE Primary structures and catalytic properties of isoenzymes encoded by the two 4-coumarate: CoA ligase genes in parsley JOURNAL Eur. J. Biochem. 176, 661-667 (1988) REFERENCE 75 AUTHORS Jaiswal,A.K., McBride,O.W., Adesnik,M. and Nebert,D.W. TITLE Human dioxin-inducible cytosolic NAD(P)H:menadione oxidoreductase. cDNA sequence and localization of gene to chromosome 16 JOURNAL J. Biol. Chem. 263, 13572-13578 (1988) REFERENCE 76 AUTHORS Karpel,R., Olami,Y., Taglicht,D., Schuldiner,S. and Padan,E. TITLE Sequencing of the gene ant which affects the Na+/H+ antiporter activity in Escherichia coli JOURNAL J. Biol. Chem. 263, 10408-10414 (1988) REFERENCE 77 AUTHORS Mellano,M.A. and Cooksey,D.A. TITLE Nucleotide sequence and organization of copper resistance genes from Pseudomonas syringae pv. tomato JOURNAL J. Bacteriol. 170, 2879-2883 (1988) REFERENCE 78 AUTHORS Coleman,J. and Raetz,C.R. TITLE First committed step of lipid A biosynthesis in Escherichia coli: sequence of the lpxA gene JOURNAL J. Bacteriol. 170, 1268-1274 (1988) REFERENCE 79 AUTHORS Gebhard,W., Schreitmuller,T., Hochstrasser,K. and Wachter,E. TITLE Complementary DNA and derived amino acid sequence of the precursor of one of the three protein components of the inter-alpha-trypsin inhibitor complex JOURNAL FEBS Lett. 229, 63-67 (1988) REFERENCE 80 AUTHORS Tomasiewicz,H.G. and McHenry,C.S. TITLE Sequence analysis of the Escherichia coli dnaE gene JOURNAL J. Bacteriol. 169, 5735-5744 (1987) REFERENCE 81 AUTHORS Crowell,D.N., Reznikoff,W.S. and Raetz,C.R. TITLE Nucleotide sequence of the Escherichia coli gene for lipid A disaccharide synthase JOURNAL J. Bacteriol. 169, 5727-5734 (1987) REFERENCE 82 AUTHORS Tabor,C.W. and Tabor,H. TITLE The speEspeD operon of Escherichia coli. Formation and processing of a proenzyme form of S-adenosylmethionine decarboxylase JOURNAL J. Biol. Chem. 262, 16037-16040 (1987) REFERENCE 83 AUTHORS Nonet,M.L., Marvel,C.C. and Tolan,D.R. TITLE The hisT-purF region of the Escherichia coli K-12 chromosome. Identification of additional genes of the hisT and purF operons JOURNAL J. Biol. Chem. 262, 12209-12217 (1987) REFERENCE 84 AUTHORS Coulton,J.W., Mason,P. and Allatt,D.D. TITLE fhuC and fhuD genes for iron (III)-ferrichrome transport into Escherichia coli K-12 JOURNAL J. Bacteriol. 169, 3844-3849 (1987) REFERENCE 85 AUTHORS Ben-Bassat,A., Bauer,K., Chang,S.Y., Myambo,K., Boosman,A. and Chang,S. TITLE Processing of the initiation methionine from proteins: properties of the Escherichia coli methionine aminopeptidase and its gene structure JOURNAL J. Bacteriol. 169, 751-757 (1987) REFERENCE 86 AUTHORS Horiuchi,T., Nagasawa,T., Takano,K. and Sekiguchi,M. TITLE A newly discovered tRNA(1Asp) gene (aspV) of Escherichia coli K12 JOURNAL Mol. Gen. Genet. 206, 356-357 (1987) REFERENCE 87 AUTHORS Gronger,P., Manian,S.S., Reilander,H., O'Connell,M., Priefer,U.B. and Puhler,A. TITLE Organization and partial sequence of a DNA region of the Rhizobium leguminosarum symbiotic plasmid pRL6JI containing the genes fixABC, nifA, nifB and a novel open reading frame JOURNAL Nucleic Acids Res. 15, 31-49 (1987) REFERENCE 88 AUTHORS Chye,M.L. and Pittard,J. TITLE Transcription control of the aroP gene in Escherichia coli K-12: analysis of operator mutants JOURNAL J. Bacteriol. 169, 386-393 (1987) REFERENCE 89 AUTHORS Richardson,K.K., Richardson,F.C., Crosby,R.M., Swenberg,J.A. and Skopek,T.R. TITLE DNA base changes and alkylation following in vivo exposure of Escherichia coli to N-methyl-N-nitrosourea or N-ethyl-N-nitrosourea JOURNAL Proc. Natl. Acad. Sci. U.S.A. 84, 344-348 (1987) REFERENCE 90 AUTHORS Blanchin-Roland,S., Blanquet,S., Schmitter,J.M. and Fayat,G. TITLE The gene for Escherichia coli diadenosine tetraphosphatase is located immediately clockwise to folA and forms an operon with ksgA JOURNAL Mol. Gen. Genet. 205, 515-522 (1986) REFERENCE 91 AUTHORS Takano,K., Nakabeppu,Y., Maki,H., Horiuchi,T. and Sekiguchi,M. TITLE Structure and function of dnaQ and mutD mutators of Escherichia coli JOURNAL Mol. Gen. Genet. 205, 9-13 (1986) REFERENCE 92 AUTHORS Mackie,G.A. TITLE Structure of the DNA distal to the gene for ribosomal protein S20 in Escherichia coli K12: presence of a strong terminator and an IS1 element JOURNAL Nucleic Acids Res. 14, 6965-6981 (1986) REFERENCE 93 AUTHORS Koster,W. and Braun,V. TITLE Iron hydroxamate transport of Escherichia coli: nucleotide sequence of the fhuB gene and identification of the protein JOURNAL Mol. Gen. Genet. 204, 435-442 (1986) REFERENCE 94 AUTHORS Breton,R., Sanfacon,H., Papayannopoulos,I., Biemann,K. and Lapointe,J. TITLE Glutamyl-tRNA synthetase of Escherichia coli. Isolation and primary structure of the gltX gene and homology with other aminoacyl-tRNA synthetases JOURNAL J. Biol. Chem. 261, 10610-10617 (1986) REFERENCE 95 AUTHORS Birnbaum,M.J., Haspel,H.C. and Rosen,O.M. TITLE Cloning and characterization of a cDNA encoding the rat brain glucose-transporter protein JOURNAL Proc. Natl. Acad. Sci. U.S.A. 83, 5784-5788 (1986) REFERENCE 96 AUTHORS Cox,E.C. and Horner,D.L. TITLE DNA sequence and coding properties of mutD(dnaQ) a dominant Escherichia coli mutator gene JOURNAL J. Mol. Biol. 190, 113-117 (1986) REFERENCE 97 AUTHORS Sekiguchi,T., Ortega-Cesena,J., Nosoh,Y., Ohashi,S., Tsuda,K. and Kanaya,S. TITLE DNA and amino-acid sequences of 3-isopropylmalate dehydrogenase of Bacillus coagulans. Comparison with the enzymes of Saccharomyces cerevisiae and Thermus thermophilus JOURNAL Biochim. Biophys. Acta 867, 36-44 (1986) REFERENCE 98 AUTHORS Ohki,M., Tamura,F., Nishimura,S. and Uchida,H. TITLE Nucleotide sequence of the Escherichia coli dnaJ gene and purification of the gene product JOURNAL J. Biol. Chem. 261, 1778-1781 (1986) REFERENCE 99 AUTHORS Lee,N., Gielow,W., Martin,R., Hamilton,E. and Fowler,A. TITLE The organization of the araBAD operon of Escherichia coli JOURNAL Gene 47, 231-244 (1986) REFERENCE 100 AUTHORS Coulton,J.W., Mason,P., Cameron,D.R., Carmel,G., Jean,R. and Rode,H.N. TITLE Protein fusions of beta-galactosidase to the ferrichrome-iron receptor of Escherichia coli K-12 JOURNAL J. Bacteriol. 165, 181-192 (1986) REFERENCE 101 AUTHORS Chong,P., Hui,I., Loo,T. and Gillam,S. TITLE Structural analysis of a new GC-specific insertion element IS186 JOURNAL FEBS Lett. 192, 47-52 (1985) REFERENCE 102 AUTHORS Icho,T., Sparrow,C.P. and Raetz,C.R. TITLE Molecular cloning and sequencing of the gene for CDP-diglyceride synthetase of Escherichia coli JOURNAL J. Biol. Chem. 260, 12078-12083 (1985) REFERENCE 103 AUTHORS Nomura,T., Aiba,H. and Ishihama,A. TITLE Transcriptional organization of the convergent overlapping dnaQ-rnh genes of Escherichia coli JOURNAL J. Biol. Chem. 260, 7122-7125 (1985) REFERENCE 104 AUTHORS Kamio,Y., Lin,C.K., Regue,M. and Wu,H.C. TITLE Characterization of the ileS-lsp operon in Escherichia coli. Identification of an open reading frame upstream of the ileS gene and potential promoter(s) for the ileS-lsp operon JOURNAL J. Biol. Chem. 260, 5616-5620 (1985) REFERENCE 105 AUTHORS Cowing,D.W., Bardwell,J.C., Craig,E.A., Woolford,C., Hendrix,R.W. and Gross,C.A. TITLE Consensus sequence for Escherichia coli heat shock gene promoters JOURNAL Proc. Natl. Acad. Sci. U.S.A. 82, 2679-2683 (1985) REFERENCE 106 AUTHORS Broome-Smith,J.K., Edelman,A., Yousif,S. and Spratt,B.G. TITLE The nucleotide sequences of the ponA and ponB genes encoding penicillin-binding protein 1A and 1B of Escherichia coli K12 JOURNAL Eur. J. Biochem. 147, 437-446 (1985) REFERENCE 107 AUTHORS Becerril,B., Valle,F., Merino,E., Riba,L. and Bolivar,F. TITLE Repetitive extragenic palindromic (REP) sequences in the Escherichia coli gdhA gene JOURNAL Gene 37, 53-62 (1985) REFERENCE 108 AUTHORS Friedberg,D., Rosenthal,E.R., Jones,J.W. and Calvo,J.M. TITLE Characterization of the 3' end of the leucine operon of Salmonella typhimurium JOURNAL Mol. Gen. Genet. 199, 486-494 (1985) REFERENCE 109 AUTHORS Bouvier,J., Richaud,C., Richaud,F., Patte,J.C. and Stragier,P. TITLE Nucleotide sequence and expression of the Escherichia coli dapB gene JOURNAL J. Biol. Chem. 259, 14829-14834 (1984) REFERENCE 110 AUTHORS Richaud,C., Richaud,F., Martin,C., Haziza,C. and Patte,J.C. TITLE Regulation of expression and nucleotide sequence of the Escherichia coli dapD gene JOURNAL J. Biol. Chem. 259, 14824-14828 (1984) REFERENCE 111 AUTHORS Nuesch,J. and Schumperli,D. TITLE Structural and functional organization of the gpt gene region of Escherichia coli JOURNAL Gene 32, 243-249 (1984) REFERENCE 112 AUTHORS Jagadeeswaran,P., Ashman,C.R., Roberts,S. and Langenberg,J. TITLE Nucleotide sequence and analysis of deletion mutants of the Escherichia coli gpt gene in plasmid pSV2 gpt JOURNAL Gene 31, 309-313 (1984) REFERENCE 113 AUTHORS Deutch,A.H., Rushlow,K.E. and Smith,C.J. TITLE Analysis of the Escherichia coli proBA locus by DNA and protein sequencing JOURNAL Nucleic Acids Res. 12, 6337-6355 (1984) REFERENCE 114 AUTHORS Bouvier,J., Patte,J.C. and Stragier,P. TITLE Multiple regulatory signals in the control region of the Escherichia coli carAB operon JOURNAL Proc. Natl. Acad. Sci. U.S.A. 81, 4139-4143 (1984) REFERENCE 115 AUTHORS Innis,M.A., Tokunaga,M., Williams,M.E., Loranger,J.M., Chang,S.Y., Chang,S. and Wu,H.C. TITLE Nucleotide sequence of the Escherichia coli prolipoprotein signal peptidase (lsp) gene JOURNAL Proc. Natl. Acad. Sci. U.S.A. 81, 3708-3712 (1984) REFERENCE 116 AUTHORS Bardwell,J.C. and Craig,E.A. TITLE Major heat shock gene of Drosophila and the Escherichia coli heat-inducible dnaK gene are homologous JOURNAL Proc. Natl. Acad. Sci. U.S.A. 81, 848-852 (1984) REFERENCE 117 AUTHORS Pratt,D. and Subramani,S. TITLE Nucleotide sequence of the Escherichia coli xanthine-guanine phosphoribosyl transferase gene JOURNAL Nucleic Acids Res. 11, 8817-8823 (1983) REFERENCE 118 AUTHORS Richardson,K.K., Fostel,J. and Skopek,T.R. TITLE Nucleotide sequence of the xanthine guanine phosphoribosyl transferase gene of E. coli JOURNAL Nucleic Acids Res. 11, 8809-8816 (1983) REFERENCE 119 AUTHORS Parsot,C., Cossart,P., Saint-Girons,I. and Cohen,G.N. TITLE Nucleotide sequence of thrC and of the transcription termination region of the threonine operon in Escherichia coli K12 JOURNAL Nucleic Acids Res. 11, 7331-7345 (1983) REFERENCE 120 AUTHORS Stephens,P.E., Lewis,H.M., Darlison,M.G. and Guest,J.R. TITLE Nucleotide sequence of the lipoamide dehydrogenase gene of Escherichia coli K12 JOURNAL Eur. J. Biochem. 135, 519-527 (1983) REFERENCE 121 AUTHORS Stephens,P.E., Darlison,M.G., Lewis,H.M. and Guest,J.R. TITLE The pyruvate dehydrogenase complex of Escherichia coli K12. Nucleotide sequence encoding the dihydrolipoamide acetyltransferase component JOURNAL Eur. J. Biochem. 133, 481-489 (1983) REFERENCE 122 AUTHORS Stephens,P.E., Darlison,M.G., Lewis,H.M. and Guest,J.R. TITLE The pyruvate dehydrogenase complex of Escherichia coli K12. Nucleotide sequence encoding the pyruvate dehydrogenase component JOURNAL Eur. J. Biochem. 133, 155-162 (1983) REFERENCE 123 AUTHORS Kanaya,S. and Crouch,R.J. TITLE Low levels of RNase H activity in Escherichia coli FB2 rnh result from a single-base change in the structural gene of RNase H JOURNAL J. Bacteriol. 154, 1021-1026 (1983) REFERENCE 124 AUTHORS Overbeeke,N., Bergmans,H., van Mansfeld,F. and Lugtenberg,B. TITLE Complete nucleotide sequence of phoE, the structural gene for the phosphate limitation inducible outer membrane pore protein of Escherichia coli K12 JOURNAL J. Mol. Biol. 163, 513-532 (1983) REFERENCE 125 AUTHORS Gilson,E., Nikaido,H. and Hofnung,M. TITLE Sequence of the malK gene in E.coli K12 JOURNAL Nucleic Acids Res. 10, 7449-7458 (1982) REFERENCE 126 AUTHORS Stoner,C.M. and Schleif,R. TITLE Is the amino acid but not the nucleotide sequence of the Escherichia coli araC gene conserved? JOURNAL J. Mol. Biol. 154, 649-652 (1982) REFERENCE 127 AUTHORS An,G., Bendiak,D.S., Mamelak,L.A. and Friesen,J.D. TITLE Organization and nucleotide sequence of a new ribosomal operon in Escherichia coli containing the genes for ribosomal protein S2 and elongation factor Ts JOURNAL Nucleic Acids Res. 9, 4163-4172 (1981) REFERENCE 128 AUTHORS Mackie,G.A. TITLE Nucleotide sequence of the gene for ribosomal protein S20 and its flanking regions JOURNAL J. Biol. Chem. 256, 8177-8182 (1981) REFERENCE 129 AUTHORS Little,J.W., Mount,D.W. and Yanisch-Perron,C.R. TITLE Purified lexA protein is a repressor of the recA and lexA genes JOURNAL Proc. Natl. Acad. Sci. U.S.A. 78, 4199-4203 (1981) REFERENCE 130 AUTHORS Mulligan,R.C. and Berg,P. TITLE Factors governing the expression of a bacterial gene in mammalian cells JOURNAL Mol. Cell. Biol. 1, 449-459 (1981) REFERENCE 131 AUTHORS Lee,N.L., Gielow,W.O. and Wallace,R.G. TITLE Mechanism of araC autoregulation and the domains of two overlapping promoters, Pc and PBAD, in the L-arabinose regulatory region of Escherichia coli JOURNAL Proc. Natl. Acad. Sci. U.S.A. 78, 752-756 (1981) REFERENCE 132 AUTHORS Cossart,P., Katinka,M. and Yaniv,M. TITLE Nucleotide sequence of the thrB gene of E. coli, and its two adjacent regions; the thrAB and thrBC junctions JOURNAL Nucleic Acids Res. 9, 339-347 (1981) REFERENCE 133 AUTHORS Miyada,C.G., Horwitz,A.H., Cass,L.G., Timko,J. and Wilcox,G. TITLE DNA sequence of the araC regulatory gene from Escherichia coli B/r JOURNAL Nucleic Acids Res. 8, 5267-5274 (1980) REFERENCE 134 AUTHORS Katinka,M., Cossart,P., Sibilli,L., Saint-Girons,I., Chalvignac,M.A., Le Bras,G., Cohen,G.N. and Yaniv,M. TITLE Nucleotide sequence of the thrA gene of Escherichia coli JOURNAL Proc. Natl. Acad. Sci. U.S.A. 77, 5730-5733 (1980) REFERENCE 135 AUTHORS Ogden,S., Haggerty,D., Stoner,C.M., Kolodrubetz,D. and Schleif,R. TITLE The Escherichia coli L-arabinose operon: binding sites of the regulatory proteins and a mechanism of positive and negative regulation JOURNAL Proc. Natl. Acad. Sci. U.S.A. 77, 3346-3350 (1980) REFERENCE 136 AUTHORS Smith,D.R. and Calvo,J.M. TITLE Nucleotide sequence of the E. coli gene coding for dihydrofolate reductase JOURNAL Nucleic Acids Res. 8, 2255-2274 (1980) REFERENCE 137 AUTHORS Johnsrud,L. TITLE DNA sequence of the transposable element IS1 JOURNAL Mol. Gen. Genet. 169, 213-218 (1979) REFERENCE 138 AUTHORS Smith,B.R. and Schleif,R. TITLE Nucleotide sequence of the L-arabinose regulatory region of Escherichia coli K12 JOURNAL J. Biol. Chem. 253, 6931-6933 (1978) REFERENCE 139 AUTHORS Greenfield,L., Boone,T. and Wilcox,G. TITLE DNA sequence of the araBAD promoter in Escherichia coli B/r JOURNAL Proc. Natl. Acad. Sci. U.S.A. 75, 4724-4728 (1978) REFERENCE 140 AUTHORS Young,R.A. and Steitz,J.A. TITLE Complementary sequences 1700 nucleotides apart form a ribonuclease III cleavage site in Escherichia coli ribosomal precursor RNA JOURNAL Proc. Natl. Acad. Sci. U.S.A. 75, 3593-3597 (1978) REFERENCE 141 AUTHORS Ohtsubo,H. and Ohtsubo,E. TITLE Nucleotide sequence of an insertion element, IS1 JOURNAL Proc. Natl. Acad. Sci. U.S.A. 75, 615-619 (1978) REFERENCE 142 AUTHORS Musso,R., Di Lauro,R., Rosenberg,M. and de Crombrugghe,B. TITLE Nucleotide sequence of the operator-promoter region of the galactose operon of Escherichia coli JOURNAL Proc. Natl. Acad. Sci. U.S.A. 74, 106-110 (1977) COMMENT FEATURES Qualifiers source /db_xref="taxon:316407" /mol_type="genomic DNA" /organism="Escherichia coli str. K-12 substr. W3110" /strain="K12" /sub_strain="W3110" protein /gene="htrE" /note="ECK0138:JW0135:b0139" /transl_table=11 BEGIN 1 MTIEYTKNYH HLTRIATFCA LLYCNTAFSA ELVEYDHTFL MGQNASNIDL SRYSEGNPAI 61 PGVYDVSVYV NDQPIINQSI TFVAIEGKKN AQACITLKNL LQFHINSPDI NNEKAVLLAR 121 DETLGNCLNL TEIIPQASVR YDVNDQRLDI DVPQAWVMKN YQNYVDPSLW ENGINAAMLS 181 YNLNGYHSET PGRKNESIYA AFNGGMNLGA WRLRASGNYN WMTDSGSNYD FKNRYVQRDI 241 ASLRSQLILG ESYTTGETFD SVSIRGIRLY SDSRMLPPTL ASFAPIIHGV ANTNAKVTIT 301 QGGYKIYETT VPPGAFVIDD LSPSGYGSDL IVTIEESDGS KRTFSQPFSS VVQMLRPGVG 361 RWDISGGQVL KDDIQDEPNL FQASYYYGLN NYLTGYTGIQ ITDNNYTAGL LGLGLNTSVG 421 AFSFDVTHSN VRIPDDKTYQ GQSYRVSWNK LFEETSTSLN IAAYRYSTQN YLGLNDALTL 481 IDEVKHPEQD LEPKSMRNYS RMKNQVTVSI NQPLKFEKKD YGSFYLSGSW SDYWASGQNR 541 SNYSIGYSNS TSWGSYSVSA QRSWNEDGDT DDSVYLSFTI PIEKLLGTEQ RTSGFQSIDT 601 QISSDFKGNN QLNVSSSGYS DNARVSYSVN TGYTMNKASK DLSYVGGYAS YESPWGTLAG 661 SISANSDNSR QVSLSTDGGF VLHSGGLTFS NDSFSDSDTL AVVQAPGAQG ARINYGNSTI 721 DRWGYGVTSA LSPYHENRIA LDINDLENDV ELKSTSAVAV PRQGSVVFAD FETVQGQSAI 781 MNITRSDGKN IPFAADIYDE QGNVIGNVGQ GGQAFVRGIE QQGNISIKWL EQSKPVSCLA 841 HYQQSPEAEK IAQSIILNGI RCQIQ //