LOCUS       BAC83915.1               417 aa    PRT              PLN 16-FEB-2008
DEFINITION  Oryza sativa Japonica Group limonene cyclase like protein protein.
ACCESSION   AP005179-15
PROTEIN_ID  BAC83915.1
SOURCE      Oryza sativa Japonica Group (Japanese rice)
  ORGANISM  Oryza sativa Japonica Group
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP
            clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa.
REFERENCE   1  (bases 1 to 127992)
  AUTHORS   Sasaki,T., Matsumoto,T. and Katayose,Y.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-MAY-2002) to the DDBJ/EMBL/GenBank databases.
            Contact:Takuji Sasaki
            National Institute of Agrobiological Sciences, Rice Genome
            Research Program; Kannondai 2-1-2, Tsukuba, Ibaraki 305-8602, Japan
            URL    :http://rgp.dna.affrc.go.jp/
REFERENCE   2  
  AUTHORS   Sasaki,T., Matsumoto,T. and Katayose,Y.
  TITLE     Oryza sativa nipponbare(GA3) genomic DNA, chromosome 7, BAC
            clone:OSJNBb0084L07
  JOURNAL   Published Only in Database(2002)
COMMENT     Genes were predicted from the integrated results of the following:
            GENSCAN (http://CCR-081.mit.edu/GENSCAN.html), FGENESH
            (http://www.softberry.com/), GeneMark.hmm
            (http://opal.biology.gatech.edu/GeneMark/), GlimmerM
            (http://www.tigr.org/tdb/glimmerm/glmr_form.html), RiceHMM
            (http://rgp.dna.affrc.go.jp/RiceHMM/), SplicePredictor
            (http://bioinformatics.iastate.edu/cgi-bin/sp.cgi), sim4
            (http://globin.cse.psu.edu/html/docs/sim4.html), gap2
            (http://www.tigr.org/software/glimmerm/), BLASTN and BLASTX. The
            genomic sequence was searched against NCBI NonRedundant Protein
            database, nr (ftp://ncbi.nlm.nih.gov/blast/db) and the cDNA
            sequence database at RGP or DDBJ. Protein homologies of the coding
            regions were searched against NCBI NonRedundant Protein database
            with BLASTP. ESTs represent the identified cDNA sequences using
            BLASTN with the corresponding DDBJ accession no. and RGP clone ID.
            Full-length cDNAs represent the identified cDNA sequences using
            BLASTN with the corresponding DDBJ accession no.
            
            A gene with identity or significant homology to a protein is
            classified based on the protein name to indicate the homology
            level such as same name, 'putative-' and '-like protein'.  A gene
            without significant homology to any protein but with full-length
            cDNA or EST homology (covering almost the entire length of partial
            sequence) is classified as an 'unknown' protein. A gene predicted
            by two or more gene prediction programs is classified as a
            'hypothetical' protein according to IRGSP standard. A gene
            predicted by a single gene prediction program is also classified
            as a probable 'hypothetical' protein and is included as a
            miscellaneous feature of the sequence.
            
            The orientation of the sequence is from M13rev to -21M13 of the
            BAC clone. This sequence of OSJNBb0084L07 clone has an overlap
            with P0506C07 (DDBJ: AP004384) clone at 5' end and with
            OSJNBb0002L09 (DDBJ: AP005877) at 3' end.  Detailed information on
            overlap and assembly quality together with annotation of this
            entry is available at http://rgp.dna.affrc.go.jp/GenomeSeq.html
FEATURES             Qualifiers
     source          /chromosome="7"
                     /clone="OSJNBb0084L07"
                     /cultivar="Nipponbare"
                     /db_xref="taxon:39947"
                     /mol_type="genomic DNA"
                     /organism="Oryza sativa Japonica Group"
     protein         /gene="OSJNBb0084L07.20-3"
                     /note="contains full-length cDNA(s): AK107609"
     intron_pos      189:0 (1/2)
     intron_pos      263:2 (2/2)
BEGIN
        1 MRASSFSSLM LPCSHGHGGG RATASTCAAA AAACLALVAL VILVVSMDPR AQASSWFFLS
       61 SSSSSSSSSS STLVRPAASS HAASLRKPSS WGGGNGGGGG GEHLLVTSSS FGSGGGARGS
      121 WSRNSTSKEV LFQGGGGGGG DEMTSTAAAP TPALIIGSSS GDGVSPSRVA VTAAAAEPTP
      181 ALAPAPAPEW GVGDAASGDD IIQVMPQAQR RRDVKLELLE LGLAKARATI REAIQNKDNK
      241 PPLTDKDYVP VGPVYRNAYA FHRSYLEMEK VFKVFVYEEG EPPVFHDGPC RSIYSTEGRF
      301 IYAMEMENRM RTRDPDQAHV FFLPFSVVKM VKMIYEPNSH DMDPLRRTIS DYINVVSTKY
      361 PHWNRSLGAD HFMLSCHDWV SNYRTKLLVR IWTDTIWTGG LSKLMVGTDE PCLDSWY
//