LOCUS BAC83909.1 1052 aa PRT PLN 16-FEB-2008 DEFINITION Oryza sativa Japonica Group putative leaf development protein Argonaute protein. ACCESSION AP005179-9 PROTEIN_ID BAC83909.1 SOURCE Oryza sativa Japonica Group (Japanese rice) ORGANISM Oryza sativa Japonica Group Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. REFERENCE 1 (bases 1 to 127992) AUTHORS Sasaki,T., Matsumoto,T. and Katayose,Y. TITLE Direct Submission JOURNAL Submitted (15-MAY-2002) to the DDBJ/EMBL/GenBank databases. Contact:Takuji Sasaki National Institute of Agrobiological Sciences, Rice Genome Research Program; Kannondai 2-1-2, Tsukuba, Ibaraki 305-8602, Japan URL :http://rgp.dna.affrc.go.jp/ REFERENCE 2 AUTHORS Sasaki,T., Matsumoto,T. and Katayose,Y. TITLE Oryza sativa nipponbare(GA3) genomic DNA, chromosome 7, BAC clone:OSJNBb0084L07 JOURNAL Published Only in Database(2002) COMMENT Genes were predicted from the integrated results of the following: GENSCAN (http://CCR-081.mit.edu/GENSCAN.html), FGENESH (http://www.softberry.com/), GeneMark.hmm (http://opal.biology.gatech.edu/GeneMark/), GlimmerM (http://www.tigr.org/tdb/glimmerm/glmr_form.html), RiceHMM (http://rgp.dna.affrc.go.jp/RiceHMM/), SplicePredictor (http://bioinformatics.iastate.edu/cgi-bin/sp.cgi), sim4 (http://globin.cse.psu.edu/html/docs/sim4.html), gap2 (http://www.tigr.org/software/glimmerm/), BLASTN and BLASTX. The genomic sequence was searched against NCBI NonRedundant Protein database, nr (ftp://ncbi.nlm.nih.gov/blast/db) and the cDNA sequence database at RGP or DDBJ. Protein homologies of the coding regions were searched against NCBI NonRedundant Protein database with BLASTP. ESTs represent the identified cDNA sequences using BLASTN with the corresponding DDBJ accession no. and RGP clone ID. Full-length cDNAs represent the identified cDNA sequences using BLASTN with the corresponding DDBJ accession no. A gene with identity or significant homology to a protein is classified based on the protein name to indicate the homology level such as same name, 'putative-' and '-like protein'. A gene without significant homology to any protein but with full-length cDNA or EST homology (covering almost the entire length of partial sequence) is classified as an 'unknown' protein. A gene predicted by two or more gene prediction programs is classified as a 'hypothetical' protein according to IRGSP standard. A gene predicted by a single gene prediction program is also classified as a probable 'hypothetical' protein and is included as a miscellaneous feature of the sequence. The orientation of the sequence is from M13rev to -21M13 of the BAC clone. This sequence of OSJNBb0084L07 clone has an overlap with P0506C07 (DDBJ: AP004384) clone at 5' end and with OSJNBb0002L09 (DDBJ: AP005877) at 3' end. Detailed information on overlap and assembly quality together with annotation of this entry is available at http://rgp.dna.affrc.go.jp/GenomeSeq.html FEATURES Qualifiers source /chromosome="7" /clone="OSJNBb0084L07" /cultivar="Nipponbare" /db_xref="taxon:39947" /mol_type="genomic DNA" /organism="Oryza sativa Japonica Group" protein /gene="OSJNBb0084L07.14" /note="contains full-length cDNA(s): AK100285" intron_pos 227:0 (1/21) intron_pos 292:2 (2/21) intron_pos 339:2 (3/21) intron_pos 383:1 (4/21) intron_pos 426:0 (5/21) intron_pos 460:2 (6/21) intron_pos 505:0 (7/21) intron_pos 544:0 (8/21) intron_pos 580:0 (9/21) intron_pos 604:0 (10/21) intron_pos 644:0 (11/21) intron_pos 690:1 (12/21) intron_pos 732:0 (13/21) intron_pos 775:0 (14/21) intron_pos 835:2 (15/21) intron_pos 857:2 (16/21) intron_pos 879:0 (17/21) intron_pos 924:1 (18/21) intron_pos 949:0 (19/21) intron_pos 980:2 (20/21) intron_pos 991:1 (21/21) BEGIN 1 MASRGGDGLV GGGRGPLGGR DGRGRGPAGG RGGGRGGGHP QQQQQQQPGY GRGDGGGRGP 61 APAAGGVVGR GTGGGGGGGR GDGGRGRGRG GGGGDGVRPA MAAAPAASTP GPVAVAARST 121 PPPTPAVQIP AVASSSSAQP AAAAQPPPAA AAVSALARDV GRQLAVVAGG GRPAPPAAPP 181 APIPVSSKGV APPSRPGFGT VGERIVVRAN HFLVRVSDND MIYLYDVSLS PPPKTRRINR 241 VVMSELARLH RESHLGGISF AYDGSKALYT AGKLPFDSMD FKIKLGKELR EIEYKVTIRR 301 AGQADLHHLH EFIAGRQRDS QQQTIQALDV VLRESPSLNY VIVSRSFYST MFGRQDIGDG 361 LECWKGYYQS LRPTQMGLSL NIDISSTPFF KPISVVEYVK NCLGTPTNAN GPDPRRPLSD 421 IDRLKVKKAL RGVRVETTHQ GKSSKYKITT ITSEPLSQLN FSMDGTTQTV IQYFSQRYKY 481 RLQYTSWPCL QSGNPSNPIY LPMEVCTIVE GQRYSKKLND KQVTGLLRAT CQPPQKREQK 541 IIEMVQHNNY PADKVVSDFR INISNQMATM PARVLPAPTL RYHDSGKEKT CNPRVGQWNM 601 INKKMVGGAV VQKWTCVNFS RMHIDAVHRL CGELVYTCNA IGMVFNEMPE IEVGSAAPNN 661 IEAALSNIHT RAPQLQLLIV ILPDVNGYYG RIKRVCETEL GIVSQCLKPG RKLLSLDRQF 721 LENVSLKINV KAGGRNSVLQ RPLVPGGLEN TTIIFGADVT HPASGEDSSA SIAAVVASMD 781 WPEITKYKAL VSAQPPRQEI IQDLFTMTEV AQNADAPAQK AEGSKKNFIC GGMFRELLMS 841 FYSKNAKRKP QRIIFYRDGV SDGQFLHVLL YEMDAIKKAI ASLDPAYRPL VTFVVVQKRH 901 HTRLFPEVHG RQDLTDRSGN VRPGTVVDTN ICHPSEFDFY LCSHAGIQGT SRPTHYHVLH 961 DENRFSADQL QMLTYNLCYT YARCTRSVSV VPPAYYAHLA AFRARYYDEP PAMDGASSVG 1021 SGGNQAAAGG QPPAVRRLPQ IKENVKDVMF YC //